Use "#!/usr/bin/env Rscript", and use ".R" instead of ".r".
@@ -33,7 +33,7 @@
(org-babel-add-interpreter "R")
-(add-to-list 'org-babel-tangle-langs '("R" "r"))
+(add-to-list 'org-babel-tangle-langs '("R" "R" "#!/usr/bin/env Rscript"))
(defun org-babel-execute:R (body params)
"Execute a block of R code with org-babel. This function is