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- ;;; org-babel-python.el --- org-babel functions for python
- ;; Copyright (C) 2009 Eric Schulte
- ;; Author: Eric Schulte
- ;; Keywords: literate programming, reproducible research
- ;; Homepage: http://orgmode.org
- ;; Version: 0.01
- ;;; License:
- ;; This program is free software; you can redistribute it and/or modify
- ;; it under the terms of the GNU General Public License as published by
- ;; the Free Software Foundation; either version 3, or (at your option)
- ;; any later version.
- ;;
- ;; This program is distributed in the hope that it will be useful,
- ;; but WITHOUT ANY WARRANTY; without even the implied warranty of
- ;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- ;; GNU General Public License for more details.
- ;;
- ;; You should have received a copy of the GNU General Public License
- ;; along with GNU Emacs; see the file COPYING. If not, write to the
- ;; Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor,
- ;; Boston, MA 02110-1301, USA.
- ;;; Commentary:
- ;; Org-Babel support for evaluating python source code.
- ;;; Code:
- (require 'org-babel)
- (require 'python)
- (org-babel-add-interpreter "python")
- (defun org-babel-execute:python (body params)
- "Execute a block of Python code with org-babel. This function is
- called by `org-babel-execute-src-block'."
- (message "executing Python source code block")
- (let* ((vars (org-babel-ref-variables params))
- (result-params (split-string (or (cdr (assoc :results params)) "")))
- (result-type (cond ((member "output" result-params) 'output)
- ((member "value" result-params) 'value)
- (t 'value)))
- (full-body (concat
- (mapconcat ;; define any variables
- (lambda (pair)
- (format "%s=%s"
- (car pair)
- (org-babel-python-var-to-python (cdr pair))))
- vars "\n") "\n" body "\n")) ;; then the source block body
- (session (org-babel-python-initiate-session (cdr (assoc :session params))))
- (results (org-babel-python-evaluate session full-body result-type)))
- (if (member "scalar" result-params)
- results
- (setq results (case result-type ;; process results based on the result-type
- ('output (let ((tmp-file (make-temp-file "org-babel-python")))
- (with-temp-file tmp-file (insert results))
- (org-babel-import-elisp-from-file tmp-file)))
- ('value (org-babel-python-table-or-results results))))
- (if (and (member "vector" results) (not (listp results)))
- (list (list results))
- results))))
- (defun org-babel-python-var-to-python (var)
- "Convert an elisp var into a string of python or python source
- code specifying a var of the same value."
- (if (listp var)
- (concat "[" (mapconcat #'org-babel-python-var-to-python var ", ") "]")
- (format "%S" var)))
- (defun org-babel-python-table-or-results (results)
- "If the results look like a table, then convert them into an
- Emacs-lisp table, otherwise return the results as a string."
- (org-babel-read
- (if (string-match "^\\[.+\\]$" results)
- (org-babel-read
- (replace-regexp-in-string
- "\\[" "(" (replace-regexp-in-string
- "\\]" ")" (replace-regexp-in-string
- ", " " " (replace-regexp-in-string
- "'" "\"" results)))))
- results)))
- ;; functions for comint evaluation
- (defun org-babel-python-initiate-session (&optional session)
- "If there is not a current inferior-process-buffer in SESSION
- then create. Return the initialized session."
- (let ((python-buffer (or session python-buffer)))
- (save-window-excursion (run-python nil session) (current-buffer))))
- (defvar org-babel-python-last-value-eval "_"
- "When evaluated by Python this returns the return value of the last statement.")
- (defvar org-babel-python-eoe-indicator "'org_babel_python_eoe'"
- "Used to indicate that evaluation is has completed.")
- (defun org-babel-python-evaluate (buffer body &optional result-type)
- "Pass BODY to the Python process in BUFFER. If RESULT-TYPE equals
- 'output then return a list of the outputs of the statements in
- BODY, if RESULT-TYPE equals 'value then return the value of the
- last statement in BODY."
- (org-babel-comint-in-buffer buffer
- (let ((string-buffer "")
- (full-body (mapconcat #'org-babel-chomp
- (list body org-babel-python-last-value-eval org-babel-python-eoe-indicator) "\n"))
- results)
- (flet ((my-filt (text) (setq string-buffer (concat string-buffer text))))
- ;; setup filter
- (add-hook 'comint-output-filter-functions 'my-filt)
- ;; pass FULL-BODY to process
- (goto-char (process-mark (get-buffer-process buffer)))
- (insert full-body)
- (comint-send-input)
- ;; wait for end-of-evaluation indicator
- (while (progn
- (goto-char comint-last-input-end)
- (not (save-excursion (and (re-search-forward comint-prompt-regexp nil t)
- (re-search-forward (regexp-quote org-babel-python-eoe-indicator) nil t)))))
- (accept-process-output (get-buffer-process buffer)))
- ;; remove filter
- (remove-hook 'comint-output-filter-functions 'my-filt))
- ;; remove echo'd FULL-BODY from input
- (if (string-match (replace-regexp-in-string "\n" "\r\n" (regexp-quote full-body)) string-buffer)
- (setq string-buffer (substring string-buffer (match-end 0))))
- ;; split results with `comint-prompt-regexp'
- (setq results (cdr (member org-babel-python-eoe-indicator
- (reverse (mapcar #'org-babel-trim (split-string string-buffer comint-prompt-regexp))))))
- (org-babel-trim (case result-type
- (output (mapconcat #'identity (reverse (cdr results)) "\n"))
- (value (car results))
- (t (reverse results)))))))
- (provide 'org-babel-python)
- ;;; org-babel-python.el ends here
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