ob-sql.el 9.7 KB

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  1. ;;; ob-sql.el --- Babel Functions for SQL -*- lexical-binding: t; -*-
  2. ;; Copyright (C) 2009-2017 Free Software Foundation, Inc.
  3. ;; Author: Eric Schulte
  4. ;; Keywords: literate programming, reproducible research
  5. ;; Homepage: http://orgmode.org
  6. ;; This file is part of GNU Emacs.
  7. ;; GNU Emacs is free software: you can redistribute it and/or modify
  8. ;; it under the terms of the GNU General Public License as published by
  9. ;; the Free Software Foundation, either version 3 of the License, or
  10. ;; (at your option) any later version.
  11. ;; GNU Emacs is distributed in the hope that it will be useful,
  12. ;; but WITHOUT ANY WARRANTY; without even the implied warranty of
  13. ;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
  14. ;; GNU General Public License for more details.
  15. ;; You should have received a copy of the GNU General Public License
  16. ;; along with GNU Emacs. If not, see <http://www.gnu.org/licenses/>.
  17. ;;; Commentary:
  18. ;; Org-Babel support for evaluating sql source code.
  19. ;; (see also ob-sqlite.el)
  20. ;;
  21. ;; SQL is somewhat unique in that there are many different engines for
  22. ;; the evaluation of sql (Mysql, PostgreSQL, etc...), so much of this
  23. ;; file will have to be implemented engine by engine.
  24. ;;
  25. ;; Also SQL evaluation generally takes place inside of a database.
  26. ;;
  27. ;; Header args used:
  28. ;; - engine
  29. ;; - cmdline
  30. ;; - dbhost
  31. ;; - dbport
  32. ;; - dbuser
  33. ;; - dbpassword
  34. ;; - database
  35. ;; - colnames (default, nil, means "yes")
  36. ;; - result-params
  37. ;; - out-file
  38. ;; The following are used but not really implemented for SQL:
  39. ;; - colname-names
  40. ;; - rownames
  41. ;; - rowname-names
  42. ;;
  43. ;; TODO:
  44. ;;
  45. ;; - support for sessions
  46. ;; - support for more engines (currently only supports mysql)
  47. ;; - what's a reasonable way to drop table data into SQL?
  48. ;;
  49. ;;; Code:
  50. (require 'ob)
  51. (declare-function org-table-import "org-table" (file arg))
  52. (declare-function orgtbl-to-csv "org-table" (table params))
  53. (declare-function org-table-to-lisp "org-table" (&optional txt))
  54. (declare-function cygwin-convert-file-name-to-windows "cygw32.c" (file &optional absolute-p))
  55. (defvar org-babel-default-header-args:sql '())
  56. (defconst org-babel-header-args:sql
  57. '((engine . :any)
  58. (out-file . :any)
  59. (dbhost . :any)
  60. (dbport . :any)
  61. (dbuser . :any)
  62. (dbpassword . :any)
  63. (database . :any))
  64. "SQL-specific header arguments.")
  65. (defun org-babel-expand-body:sql (body params)
  66. "Expand BODY according to the values of PARAMS."
  67. (org-babel-sql-expand-vars
  68. body (org-babel--get-vars params)))
  69. (defun org-babel-sql-dbstring-mysql (host port user password database)
  70. "Make MySQL cmd line args for database connection. Pass nil to omit that arg."
  71. (combine-and-quote-strings
  72. (delq nil
  73. (list (when host (concat "-h" host))
  74. (when port (format "-P%d" port))
  75. (when user (concat "-u" user))
  76. (when password (concat "-p" password))
  77. (when database (concat "-D" database))))))
  78. (defun org-babel-sql-dbstring-postgresql (host port user database)
  79. "Make PostgreSQL command line args for database connection.
  80. Pass nil to omit that arg."
  81. (combine-and-quote-strings
  82. (delq nil
  83. (list (when host (concat "-h" host))
  84. (when port (format "-p%d" port))
  85. (when user (concat "-U" user))
  86. (when database (concat "-d" database))))))
  87. (defun org-babel-sql-dbstring-oracle (host port user password database)
  88. "Make Oracle command line args for database connection."
  89. (format "%s/%s@%s:%s/%s" user password host port database))
  90. (defun org-babel-sql-dbstring-mssql (host user password database)
  91. "Make sqlcmd commmand line args for database connection.
  92. `sqlcmd' is the preferred command line tool to access Microsoft
  93. SQL Server on Windows and Linux platform."
  94. (mapconcat #'identity
  95. (delq nil
  96. (list (when host (format "-S \"%s\"" host))
  97. (when user (format "-U \"%s\"" user))
  98. (when password (format "-P \"%s\"" password))
  99. (when database (format "-d \"%s\"" database))))
  100. " "))
  101. (defun org-babel-sql-convert-standard-filename (file)
  102. "Convert FILE to OS standard file name.
  103. If in Cygwin environment, uses Cygwin specific function to
  104. convert the file name. In a Windows-NT environment, do nothing.
  105. Otherwise, use Emacs' standard conversion function."
  106. (cond ((fboundp 'cygwin-convert-file-name-to-windows)
  107. (format "%S" (cygwin-convert-file-name-to-windows file)))
  108. ((string= "windows-nt" system-type) file)
  109. (t (format "%S" (convert-standard-filename file)))))
  110. (defun org-babel-execute:sql (body params)
  111. "Execute a block of Sql code with Babel.
  112. This function is called by `org-babel-execute-src-block'."
  113. (let* ((result-params (cdr (assq :result-params params)))
  114. (cmdline (cdr (assq :cmdline params)))
  115. (dbhost (cdr (assq :dbhost params)))
  116. (dbport (cdr (assq :dbport params)))
  117. (dbuser (cdr (assq :dbuser params)))
  118. (dbpassword (cdr (assq :dbpassword params)))
  119. (database (cdr (assq :database params)))
  120. (engine (cdr (assq :engine params)))
  121. (colnames-p (not (equal "no" (cdr (assq :colnames params)))))
  122. (in-file (org-babel-temp-file "sql-in-"))
  123. (out-file (or (cdr (assq :out-file params))
  124. (org-babel-temp-file "sql-out-")))
  125. (header-delim "")
  126. (command (pcase (intern engine)
  127. (`dbi (format "dbish --batch %s < %s | sed '%s' > %s"
  128. (or cmdline "")
  129. (org-babel-process-file-name in-file)
  130. "/^+/d;s/^|//;s/(NULL)/ /g;$d"
  131. (org-babel-process-file-name out-file)))
  132. (`monetdb (format "mclient -f tab %s < %s > %s"
  133. (or cmdline "")
  134. (org-babel-process-file-name in-file)
  135. (org-babel-process-file-name out-file)))
  136. (`mssql (format "sqlcmd %s -s \"\t\" %s -i %s -o %s"
  137. (or cmdline "")
  138. (org-babel-sql-dbstring-mssql
  139. dbhost dbuser dbpassword database)
  140. (org-babel-sql-convert-standard-filename
  141. (org-babel-process-file-name in-file))
  142. (org-babel-sql-convert-standard-filename
  143. (org-babel-process-file-name out-file))))
  144. (`mysql (format "mysql %s %s %s < %s > %s"
  145. (org-babel-sql-dbstring-mysql
  146. dbhost dbport dbuser dbpassword database)
  147. (if colnames-p "" "-N")
  148. (or cmdline "")
  149. (org-babel-process-file-name in-file)
  150. (org-babel-process-file-name out-file)))
  151. (`postgresql (format
  152. "%spsql --set=\"ON_ERROR_STOP=1\" %s -A -P \
  153. footer=off -F \"\t\" %s -f %s -o %s %s"
  154. (if dbpassword
  155. (format "PGPASSWORD=%s " dbpassword)
  156. "")
  157. (if colnames-p "" "-t")
  158. (org-babel-sql-dbstring-postgresql
  159. dbhost dbport dbuser database)
  160. (org-babel-process-file-name in-file)
  161. (org-babel-process-file-name out-file)
  162. (or cmdline "")))
  163. (`oracle (format
  164. "sqlplus -s %s < %s > %s"
  165. (org-babel-sql-dbstring-oracle
  166. dbhost dbport dbuser dbpassword database)
  167. (org-babel-process-file-name in-file)
  168. (org-babel-process-file-name out-file)))
  169. (_ (error "No support for the %s SQL engine" engine)))))
  170. (with-temp-file in-file
  171. (insert
  172. (pcase (intern engine)
  173. (`dbi "/format partbox\n")
  174. (`oracle "SET PAGESIZE 50000
  175. SET NEWPAGE 0
  176. SET TAB OFF
  177. SET SPACE 0
  178. SET LINESIZE 9999
  179. SET ECHO OFF
  180. SET FEEDBACK OFF
  181. SET VERIFY OFF
  182. SET HEADING ON
  183. SET MARKUP HTML OFF SPOOL OFF
  184. SET COLSEP '|'
  185. ")
  186. (`mssql "SET NOCOUNT ON
  187. ")
  188. (_ ""))
  189. (org-babel-expand-body:sql body params)))
  190. (org-babel-eval command "")
  191. (org-babel-result-cond result-params
  192. (with-temp-buffer
  193. (progn (insert-file-contents-literally out-file) (buffer-string)))
  194. (with-temp-buffer
  195. (cond
  196. ((memq (intern engine) '(dbi mysql postgresql))
  197. ;; Add header row delimiter after column-names header in first line
  198. (cond
  199. (colnames-p
  200. (with-temp-buffer
  201. (insert-file-contents out-file)
  202. (goto-char (point-min))
  203. (forward-line 1)
  204. (insert "-\n")
  205. (setq header-delim "-")
  206. (write-file out-file)))))
  207. (t
  208. ;; Need to figure out the delimiter for the header row
  209. (with-temp-buffer
  210. (insert-file-contents out-file)
  211. (goto-char (point-min))
  212. (when (re-search-forward "^\\(-+\\)[^-]" nil t)
  213. (setq header-delim (match-string-no-properties 1)))
  214. (goto-char (point-max))
  215. (forward-char -1)
  216. (while (looking-at "\n")
  217. (delete-char 1)
  218. (goto-char (point-max))
  219. (forward-char -1))
  220. (write-file out-file))))
  221. (org-table-import out-file '(16))
  222. (org-babel-reassemble-table
  223. (mapcar (lambda (x)
  224. (if (string= (car x) header-delim)
  225. 'hline
  226. x))
  227. (org-table-to-lisp))
  228. (org-babel-pick-name (cdr (assq :colname-names params))
  229. (cdr (assq :colnames params)))
  230. (org-babel-pick-name (cdr (assq :rowname-names params))
  231. (cdr (assq :rownames params))))))))
  232. (defun org-babel-sql-expand-vars (body vars)
  233. "Expand the variables held in VARS in BODY."
  234. (mapc
  235. (lambda (pair)
  236. (setq body
  237. (replace-regexp-in-string
  238. (format "$%s" (car pair))
  239. (let ((val (cdr pair)))
  240. (if (listp val)
  241. (let ((data-file (org-babel-temp-file "sql-data-")))
  242. (with-temp-file data-file
  243. (insert (orgtbl-to-csv
  244. val '(:fmt (lambda (el) (if (stringp el)
  245. el
  246. (format "%S" el)))))))
  247. data-file)
  248. (if (stringp val) val (format "%S" val))))
  249. body)))
  250. vars)
  251. body)
  252. (defun org-babel-prep-session:sql (_session _params)
  253. "Raise an error because Sql sessions aren't implemented."
  254. (error "SQL sessions not yet implemented"))
  255. (provide 'ob-sql)
  256. ;;; ob-sql.el ends here