| 123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135136137138139140141142143144145146147148149150151152153154155156157158159160161162163164165166167168169170171172173174175176177178179180181182183184185186187188189190191192193194195196197198199200201202203204205206207208209210211212213214215216217218219220221222223224225226227228229230231232233234235236237238239240241242243244245246247248249250251252253254255 | ;;; ob-run.el --- org-babel functions for external code evaluation;; Copyright (C) 2009, 2010  Free Software Foundation, Inc.;; Author: Eric Schulte;; Keywords: literate programming, reproducible research, comint;; Homepage: http://orgmode.org;; Version: 7.01trans;; This file is part of GNU Emacs.;; GNU Emacs is free software: you can redistribute it and/or modify;; it under the terms of the GNU General Public License as published by;; the Free Software Foundation, either version 3 of the License, or;; (at your option) any later version.;; GNU Emacs is distributed in the hope that it will be useful,;; but WITHOUT ANY WARRANTY; without even the implied warranty of;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the;; GNU General Public License for more details.;; You should have received a copy of the GNU General Public License;; along with GNU Emacs.  If not, see <http://www.gnu.org/licenses/>.;;; Commentary:;; These functions build existing Emacs support for executing external;; shell commands.;;; Code:(require 'ob)(eval-when-compile (require 'cl))(defun org-babel-eval-error-notify (exit-code stderr)  "Open a buffer to display STDERR and a message with the value of EXIT-CODE."  (let ((buf (get-buffer-create "*Org-Babel Error Output*")))    (with-current-buffer buf      (goto-char (point-max))      (save-excursion (insert stderr)))    (display-buffer buf))  (message "Babel evaluation exited with code %S" exit-code))(defun org-babel-eval (cmd body)  "Run CMD on BODY.If CMD succeeds then return it's results, otherwise displaySTDERR with `org-babel-eval-error-notify'."  (let ((err-buff (get-buffer-create "*Org-Babel Error*")) exit-code)    (with-current-buffer err-buff (erase-buffer))    (with-temp-buffer      (insert body)      (setq exit-code	    (org-babel-shell-command-on-region	     (point-min) (point-max) cmd t 'replace err-buff))      (if (or (not (numberp exit-code)) (> exit-code 0))	  (progn	    (with-current-buffer err-buff	      (org-babel-eval-error-notify exit-code (buffer-string)))	    nil)	(buffer-string)))))(defun org-babel-eval-read-file (file)  "Return the contents of FILE as a string."  (with-temp-buffer (insert-file-contents		     (org-babel-maybe-remote-file file))		    (buffer-string)))(defun org-babel-shell-command-on-region (start end command				      &optional output-buffer replace				      error-buffer display-error-buffer)  "Execute COMMAND in an inferior shell with region as input.Fixes bugs in the emacs 23.1.1 version of `shell-command-on-region'Normally display output (if any) in temp buffer `*Shell Command Output*';Prefix arg means replace the region with it.  Return the exit code ofCOMMAND.To specify a coding system for converting non-ASCII characters inthe input and output to the shell command, use\\[universal-coding-system-argument] before this command.  Bydefault, the input (from the current buffer) is encoded in thesame coding system that will be used to save the file,`buffer-file-coding-system'.  If the output is going to replacethe region, then it is decoded from that same coding system.The noninteractive arguments are START, END, COMMAND,OUTPUT-BUFFER, REPLACE, ERROR-BUFFER, and DISPLAY-ERROR-BUFFER.Noninteractive callers can specify coding systems by binding`coding-system-for-read' and `coding-system-for-write'.If the command generates output, the output may be displayedin the echo area or in a buffer.If the output is short enough to display in the echo area\(determined by the variable `max-mini-window-height' if`resize-mini-windows' is non-nil), it is shown there.  Otherwiseit is displayed in the buffer `*Shell Command Output*'.  The outputis available in that buffer in both cases.If there is output and an error, a message about the errorappears at the end of the output.If there is no output, or if output is inserted in the current buffer,then `*Shell Command Output*' is deleted.If the optional fourth argument OUTPUT-BUFFER is non-nil,that says to put the output in some other buffer.If OUTPUT-BUFFER is a buffer or buffer name, put the output there.If OUTPUT-BUFFER is not a buffer and not nil,insert output in the current buffer.In either case, the output is inserted after point (leaving mark after it).If REPLACE, the optional fifth argument, is non-nil, that means insertthe output in place of text from START to END, putting point and markaround it.If optional sixth argument ERROR-BUFFER is non-nil, it is a bufferor buffer name to which to direct the command's standard error output.If it is nil, error output is mingled with regular output.If DISPLAY-ERROR-BUFFER is non-nil, display the error buffer if therewere any errors.  (This is always t, interactively.)In an interactive call, the variable `shell-command-default-error-buffer'specifies the value of ERROR-BUFFER."  (interactive (let (string)		 (unless (mark)		   (error "The mark is not set now, so there is no region"))		 ;; Do this before calling region-beginning		 ;; and region-end, in case subprocess output		 ;; relocates them while we are in the minibuffer.		 (setq string (read-shell-command "Shell command on region: "))		 ;; call-interactively recognizes region-beginning and		 ;; region-end specially, leaving them in the history.		 (list (region-beginning) (region-end)		       string		       current-prefix-arg		       current-prefix-arg		       shell-command-default-error-buffer		       t)))  (let ((error-file	 (if error-buffer	     (make-temp-file	      (expand-file-name "scor"				(or (unless (featurep 'xemacs)				      small-temporary-file-directory)				    temporary-file-directory)))	   nil))	exit-status)    (if (or replace	    (and output-buffer		 (not (or (bufferp output-buffer) (stringp output-buffer)))))	;; Replace specified region with output from command.	(let ((swap (and replace (< start end))))	  ;; Don't muck with mark unless REPLACE says we should.	  (goto-char start)	  (and replace (push-mark (point) 'nomsg))	  (setq exit-status		(call-process-region start end shell-file-name t				     (if error-file					 (list output-buffer error-file)				       t)				     nil shell-command-switch command))	  ;; It is rude to delete a buffer which the command is not using.	  ;; (let ((shell-buffer (get-buffer "*Shell Command Output*")))	  ;;   (and shell-buffer (not (eq shell-buffer (current-buffer)))	  ;; 	 (kill-buffer shell-buffer)))	  ;; Don't muck with mark unless REPLACE says we should.	  (and replace swap (exchange-point-and-mark)))      ;; No prefix argument: put the output in a temp buffer,      ;; replacing its entire contents.      (let ((buffer (get-buffer-create		     (or output-buffer "*Shell Command Output*"))))	(unwind-protect	    (if (eq buffer (current-buffer))		;; If the input is the same buffer as the output,		;; delete everything but the specified region,		;; then replace that region with the output.		(progn (setq buffer-read-only nil)		       (delete-region (max start end) (point-max))		       (delete-region (point-min) (min start end))		       (setq exit-status			     (call-process-region (point-min) (point-max)						  shell-file-name t						  (if error-file						      (list t error-file)						    t)						  nil shell-command-switch						  command)))	      ;; Clear the output buffer, then run the command with	      ;; output there.	      (let ((directory default-directory))		(with-current-buffer buffer		  (setq buffer-read-only nil)		  (if (not output-buffer)		      (setq default-directory directory))		  (erase-buffer)))	      (setq exit-status		    (call-process-region start end shell-file-name nil					 (if error-file					     (list buffer error-file)					   buffer)					 nil shell-command-switch command)))	  ;; Report the output.	  (with-current-buffer buffer	    (setq mode-line-process		  (cond ((null exit-status)			 " - Error")			((stringp exit-status)			 (format " - Signal [%s]" exit-status))			((not (equal 0 exit-status))			 (format " - Exit [%d]" exit-status)))))	  (if (with-current-buffer buffer (> (point-max) (point-min)))	      ;; There's some output, display it	      (display-message-or-buffer buffer)	    ;; No output; error?	    (let ((output		   (if (and error-file			    (< 0 (nth 7 (file-attributes error-file))))		       "some error output"		     "no output")))	      (cond ((null exit-status)		     (message "(Shell command failed with error)"))		    ((equal 0 exit-status)		     (message "(Shell command succeeded with %s)"			      output))		    ((stringp exit-status)		     (message "(Shell command killed by signal %s)"			      exit-status))		    (t		     (message "(Shell command failed with code %d and %s)"			      exit-status output))))	    ;; Don't kill: there might be useful info in the undo-log.	    ;; (kill-buffer buffer)	    ))))    (when (and error-file (file-exists-p error-file))      (if (< 0 (nth 7 (file-attributes error-file)))	  (with-current-buffer (get-buffer-create error-buffer)	    (let ((pos-from-end (- (point-max) (point))))	      (or (bobp)		  (insert "\f\n"))	      ;; Do no formatting while reading error file,	      ;; because that can run a shell command, and we	      ;; don't want that to cause an infinite recursion.	      (format-insert-file error-file nil)	      ;; Put point after the inserted errors.	      (goto-char (- (point-max) pos-from-end)))	    (and display-error-buffer		 (display-buffer (current-buffer)))))      (delete-file error-file))    exit-status))(provide 'ob-eval);; arch-tag: 5328b17f-957d-42d9-94da-a2952682d04d;;; ob-comint.el ends here
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