ob.el 98 KB

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  1. ;;; ob.el --- working with code blocks in org-mode
  2. ;; Copyright (C) 2009-2012 Free Software Foundation, Inc.
  3. ;; Authors: Eric Schulte
  4. ;; Dan Davison
  5. ;; Keywords: literate programming, reproducible research
  6. ;; Homepage: http://orgmode.org
  7. ;; This file is part of GNU Emacs.
  8. ;; GNU Emacs is free software: you can redistribute it and/or modify
  9. ;; it under the terms of the GNU General Public License as published by
  10. ;; the Free Software Foundation, either version 3 of the License, or
  11. ;; (at your option) any later version.
  12. ;; GNU Emacs is distributed in the hope that it will be useful,
  13. ;; but WITHOUT ANY WARRANTY; without even the implied warranty of
  14. ;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
  15. ;; GNU General Public License for more details.
  16. ;; You should have received a copy of the GNU General Public License
  17. ;; along with GNU Emacs. If not, see <http://www.gnu.org/licenses/>.
  18. ;;; Code:
  19. (eval-when-compile
  20. (require 'cl))
  21. (require 'ob-eval)
  22. (require 'org-macs)
  23. (defvar org-babel-call-process-region-original)
  24. (defvar org-src-lang-modes)
  25. (defvar org-babel-library-of-babel)
  26. (declare-function show-all "outline" ())
  27. (declare-function org-reduce "org" (CL-FUNC CL-SEQ &rest CL-KEYS))
  28. (declare-function org-mark-ring-push "org" (&optional pos buffer))
  29. (declare-function org-strip-protective-commas "org" (beg end))
  30. (declare-function tramp-compat-make-temp-file "tramp-compat"
  31. (filename &optional dir-flag))
  32. (declare-function tramp-dissect-file-name "tramp" (name &optional nodefault))
  33. (declare-function tramp-file-name-user "tramp" (vec))
  34. (declare-function tramp-file-name-host "tramp" (vec))
  35. (declare-function with-parsed-tramp-file-name "tramp" (filename var &rest body))
  36. (declare-function org-icompleting-read "org" (&rest args))
  37. (declare-function org-edit-src-code "org-src"
  38. (&optional context code edit-buffer-name quietp))
  39. (declare-function org-edit-src-exit "org-src" (&optional context))
  40. (declare-function org-open-at-point "org" (&optional in-emacs reference-buffer))
  41. (declare-function org-save-outline-visibility "org" (use-markers &rest body))
  42. (declare-function org-outline-overlay-data "org" (&optional use-markers))
  43. (declare-function org-set-outline-overlay-data "org" (data))
  44. (declare-function org-narrow-to-subtree "org" ())
  45. (declare-function org-entry-get "org"
  46. (pom property &optional inherit literal-nil))
  47. (declare-function org-make-options-regexp "org" (kwds &optional extra))
  48. (declare-function org-do-remove-indentation "org" (&optional n))
  49. (declare-function org-show-context "org" (&optional key))
  50. (declare-function org-at-table-p "org" (&optional table-type))
  51. (declare-function org-cycle "org" (&optional arg))
  52. (declare-function org-uniquify "org" (list))
  53. (declare-function org-current-level "org" ())
  54. (declare-function org-strip-protective-commas "org" (beg end))
  55. (declare-function org-table-import "org-table" (file arg))
  56. (declare-function org-add-hook "org-compat"
  57. (hook function &optional append local))
  58. (declare-function org-table-align "org-table" ())
  59. (declare-function org-table-end "org-table" (&optional table-type))
  60. (declare-function orgtbl-to-generic "org-table" (table params))
  61. (declare-function orgtbl-to-orgtbl "org-table" (table params))
  62. (declare-function org-babel-tangle-comment-links "ob-tangle" (&optional info))
  63. (declare-function org-babel-lob-get-info "ob-lob" nil)
  64. (declare-function org-babel-ref-split-args "ob-ref" (arg-string))
  65. (declare-function org-babel-ref-parse "ob-ref" (assignment))
  66. (declare-function org-babel-ref-resolve "ob-ref" (ref))
  67. (declare-function org-babel-ref-goto-headline-id "ob-ref" (id))
  68. (declare-function org-babel-ref-headline-body "ob-ref" ())
  69. (declare-function org-babel-lob-execute-maybe "ob-lob" ())
  70. (declare-function org-number-sequence "org-compat" (from &optional to inc))
  71. (declare-function org-at-item-p "org-list" ())
  72. (declare-function org-list-parse-list "org-list" (&optional delete))
  73. (declare-function org-list-to-generic "org-list" (LIST PARAMS))
  74. (declare-function org-list-struct "org-list" ())
  75. (declare-function org-list-prevs-alist "org-list" (struct))
  76. (declare-function org-list-get-list-end "org-list" (item struct prevs))
  77. (declare-function org-strip-protective-commas "org" (beg end))
  78. (defgroup org-babel nil
  79. "Code block evaluation and management in `org-mode' documents."
  80. :tag "Babel"
  81. :group 'org)
  82. (defcustom org-confirm-babel-evaluate t
  83. "Confirm before evaluation.
  84. Require confirmation before interactively evaluating code
  85. blocks in Org-mode buffers. The default value of this variable
  86. is t, meaning confirmation is required for any code block
  87. evaluation. This variable can be set to nil to inhibit any
  88. future confirmation requests. This variable can also be set to a
  89. function which takes two arguments the language of the code block
  90. and the body of the code block. Such a function should then
  91. return a non-nil value if the user should be prompted for
  92. execution or nil if no prompt is required.
  93. Warning: Disabling confirmation may result in accidental
  94. evaluation of potentially harmful code. It may be advisable
  95. remove code block execution from C-c C-c as further protection
  96. against accidental code block evaluation. The
  97. `org-babel-no-eval-on-ctrl-c-ctrl-c' variable can be used to
  98. remove code block execution from the C-c C-c keybinding."
  99. :group 'org-babel
  100. :version "24.1"
  101. :type '(choice boolean function))
  102. ;; don't allow this variable to be changed through file settings
  103. (put 'org-confirm-babel-evaluate 'safe-local-variable (lambda (x) (eq x t)))
  104. (defcustom org-babel-no-eval-on-ctrl-c-ctrl-c nil
  105. "Remove code block evaluation from the C-c C-c key binding."
  106. :group 'org-babel
  107. :version "24.1"
  108. :type 'boolean)
  109. (defcustom org-babel-results-keyword "RESULTS"
  110. "Keyword used to name results generated by code blocks.
  111. Should be either RESULTS or NAME however any capitalization may
  112. be used."
  113. :group 'org-babel
  114. :type 'string)
  115. (defcustom org-babel-noweb-wrap-start "<<"
  116. "String used to begin a noweb reference in a code block.
  117. See also `org-babel-noweb-wrap-end'."
  118. :group 'org-babel
  119. :type 'string)
  120. (defcustom org-babel-noweb-wrap-end ">>"
  121. "String used to end a noweb reference in a code block.
  122. See also `org-babel-noweb-wrap-start'."
  123. :group 'org-babel
  124. :type 'string)
  125. (defun org-babel-noweb-wrap (&optional regexp)
  126. (concat org-babel-noweb-wrap-start
  127. (or regexp "\\([^ \t\n].+?[^ \t]\\|[^ \t\n]\\)")
  128. org-babel-noweb-wrap-end))
  129. (defvar org-babel-src-name-regexp
  130. "^[ \t]*#\\+name:[ \t]*"
  131. "Regular expression used to match a source name line.")
  132. (defvar org-babel-multi-line-header-regexp
  133. "^[ \t]*#\\+headers?:[ \t]*\\([^\n]*\\)$"
  134. "Regular expression used to match multi-line header arguments.")
  135. (defvar org-babel-src-name-w-name-regexp
  136. (concat org-babel-src-name-regexp
  137. "\\("
  138. org-babel-multi-line-header-regexp
  139. "\\)*"
  140. "\\([^ ()\f\t\n\r\v]+\\)\\(\(\\(.*\\)\)\\|\\)")
  141. "Regular expression matching source name lines with a name.")
  142. (defvar org-babel-src-block-regexp
  143. (concat
  144. ;; (1) indentation (2) lang
  145. "^\\([ \t]*\\)#\\+begin_src[ \t]+\\([^ \f\t\n\r\v]+\\)[ \t]*"
  146. ;; (3) switches
  147. "\\([^\":\n]*\"[^\"\n*]*\"[^\":\n]*\\|[^\":\n]*\\)"
  148. ;; (4) header arguments
  149. "\\([^\n]*\\)\n"
  150. ;; (5) body
  151. "\\([^\000]*?\n\\)?[ \t]*#\\+end_src")
  152. "Regexp used to identify code blocks.")
  153. (defvar org-babel-inline-src-block-regexp
  154. (concat
  155. ;; (1) replacement target (2) lang
  156. "\\(?:^\\|[^-[:alnum:]]\\)\\(src_\\([^ \f\t\n\r\v]+\\)"
  157. ;; (3,4) (unused, headers)
  158. "\\(\\|\\[\\(.*?\\)\\]\\)"
  159. ;; (5) body
  160. "{\\([^\f\n\r\v]+?\\)}\\)")
  161. "Regexp used to identify inline src-blocks.")
  162. (defun org-babel-get-header (params key &optional others)
  163. "Select only header argument of type KEY from a list.
  164. Optional argument OTHERS indicates that only the header that do
  165. not match KEY should be returned."
  166. (delq nil
  167. (mapcar
  168. (lambda (p) (when (funcall (if others #'not #'identity) (eq (car p) key)) p))
  169. params)))
  170. (defun org-babel-get-inline-src-block-matches()
  171. "Set match data if within body of an inline source block.
  172. Returns non-nil if match-data set"
  173. (let ((src-at-0-p (save-excursion
  174. (beginning-of-line 1)
  175. (string= "src" (thing-at-point 'word))))
  176. (first-line-p (= 1 (line-number-at-pos)))
  177. (orig (point)))
  178. (let ((search-for (cond ((and src-at-0-p first-line-p "src_"))
  179. (first-line-p "[[:punct:] \t]src_")
  180. (t "[[:punct:] \f\t\n\r\v]src_")))
  181. (lower-limit (if first-line-p
  182. nil
  183. (- (point-at-bol) 1))))
  184. (save-excursion
  185. (when (or (and src-at-0-p (bobp))
  186. (and (re-search-forward "}" (point-at-eol) t)
  187. (re-search-backward search-for lower-limit t)
  188. (> orig (point))))
  189. (when (looking-at org-babel-inline-src-block-regexp)
  190. t ))))))
  191. (defvar org-babel-inline-lob-one-liner-regexp)
  192. (defun org-babel-get-lob-one-liner-matches()
  193. "Set match data if on line of an lob one liner.
  194. Returns non-nil if match-data set"
  195. (save-excursion
  196. (unless (= (point) (point-at-bol)) ;; move before inline block
  197. (re-search-backward "[ \f\t\n\r\v]" nil t))
  198. (if (looking-at org-babel-inline-lob-one-liner-regexp)
  199. t
  200. nil)))
  201. (defun org-babel-get-src-block-info (&optional light)
  202. "Get information on the current source block.
  203. Optional argument LIGHT does not resolve remote variable
  204. references; a process which could likely result in the execution
  205. of other code blocks.
  206. Returns a list
  207. (language body header-arguments-alist switches name indent)."
  208. (let ((case-fold-search t) head info name indent)
  209. ;; full code block
  210. (if (setq head (org-babel-where-is-src-block-head))
  211. (save-excursion
  212. (goto-char head)
  213. (setq info (org-babel-parse-src-block-match))
  214. (setq indent (car (last info)))
  215. (setq info (butlast info))
  216. (while (and (forward-line -1)
  217. (looking-at org-babel-multi-line-header-regexp))
  218. (setf (nth 2 info)
  219. (org-babel-merge-params
  220. (nth 2 info)
  221. (org-babel-parse-header-arguments (match-string 1)))))
  222. (when (looking-at org-babel-src-name-w-name-regexp)
  223. (setq name (org-babel-clean-text-properties (match-string 3)))
  224. (when (and (match-string 5) (> (length (match-string 5)) 0))
  225. (setf (nth 2 info) ;; merge functional-syntax vars and header-args
  226. (org-babel-merge-params
  227. (mapcar
  228. (lambda (ref) (cons :var ref))
  229. (mapcar
  230. (lambda (var) ;; check that each variable is initialized
  231. (if (string-match ".+=.+" var)
  232. var
  233. (error
  234. "variable \"%s\"%s must be assigned a default value"
  235. var (if name (format " in block \"%s\"" name) ""))))
  236. (org-babel-ref-split-args (match-string 5))))
  237. (nth 2 info))))))
  238. ;; inline source block
  239. (when (org-babel-get-inline-src-block-matches)
  240. (setq info (org-babel-parse-inline-src-block-match))))
  241. ;; resolve variable references and add summary parameters
  242. (when (and info (not light))
  243. (setf (nth 2 info) (org-babel-process-params (nth 2 info))))
  244. (when info (append info (list name indent)))))
  245. (defvar org-current-export-file) ; dynamically bound
  246. (defun org-babel-confirm-evaluate (info)
  247. "Confirm evaluation of the code block INFO.
  248. This behavior can be suppressed by setting the value of
  249. `org-confirm-babel-evaluate' to nil, in which case all future
  250. interactive code block evaluations will proceed without any
  251. confirmation from the user.
  252. Note disabling confirmation may result in accidental evaluation
  253. of potentially harmful code."
  254. (let* ((eval (or (cdr (assoc :eval (nth 2 info)))
  255. (when (assoc :noeval (nth 2 info)) "no")))
  256. (query (cond ((equal eval "query") t)
  257. ((and org-current-export-file
  258. (equal eval "query-export")) t)
  259. ((functionp org-confirm-babel-evaluate)
  260. (funcall org-confirm-babel-evaluate
  261. (nth 0 info) (nth 1 info)))
  262. (t org-confirm-babel-evaluate))))
  263. (if (or (equal eval "never") (equal eval "no")
  264. (and org-current-export-file (or (equal eval "no-export")
  265. (equal eval "never-export")))
  266. (and query
  267. (not (yes-or-no-p
  268. (format "Evaluate this%scode block%son your system? "
  269. (if info (format " %s " (nth 0 info)) " ")
  270. (if (nth 4 info)
  271. (format " (%s) " (nth 4 info)) " "))))))
  272. (prog1 nil (message "Evaluation %s"
  273. (if (or (equal eval "never") (equal eval "no")
  274. (equal eval "no-export")
  275. (equal eval "never-export"))
  276. "Disabled" "Aborted")))
  277. t)))
  278. ;;;###autoload
  279. (defun org-babel-execute-safely-maybe ()
  280. (unless org-babel-no-eval-on-ctrl-c-ctrl-c
  281. (org-babel-execute-maybe)))
  282. (add-hook 'org-ctrl-c-ctrl-c-hook 'org-babel-execute-safely-maybe)
  283. ;;;###autoload
  284. (defun org-babel-execute-maybe ()
  285. (interactive)
  286. (or (org-babel-execute-src-block-maybe)
  287. (org-babel-lob-execute-maybe)))
  288. (defun org-babel-execute-src-block-maybe ()
  289. "Conditionally execute a source block.
  290. Detect if this is context for a Babel src-block and if so
  291. then run `org-babel-execute-src-block'."
  292. (interactive)
  293. (let ((info (org-babel-get-src-block-info)))
  294. (if info
  295. (progn (org-babel-eval-wipe-error-buffer)
  296. (org-babel-execute-src-block current-prefix-arg info) t) nil)))
  297. ;;;###autoload
  298. (defun org-babel-view-src-block-info ()
  299. "Display information on the current source block.
  300. This includes header arguments, language and name, and is largely
  301. a window into the `org-babel-get-src-block-info' function."
  302. (interactive)
  303. (let ((info (org-babel-get-src-block-info 'light)))
  304. (flet ((full (it) (> (length it) 0))
  305. (printf (fmt &rest args) (princ (apply #'format fmt args))))
  306. (when info
  307. (with-help-window (help-buffer)
  308. (let ((name (nth 4 info))
  309. (lang (nth 0 info))
  310. (switches (nth 3 info))
  311. (header-args (nth 2 info)))
  312. (when name (printf "Name: %s\n" name))
  313. (when lang (printf "Lang: %s\n" lang))
  314. (when (full switches) (printf "Switches: %s\n" switches))
  315. (printf "Header Arguments:\n")
  316. (dolist (pair (sort header-args
  317. (lambda (a b) (string< (symbol-name (car a))
  318. (symbol-name (car b))))))
  319. (when (full (cdr pair))
  320. (printf "\t%S%s\t%s\n"
  321. (car pair)
  322. (if (> (length (format "%S" (car pair))) 7) "" "\t")
  323. (cdr pair))))))))))
  324. ;;;###autoload
  325. (defun org-babel-expand-src-block-maybe ()
  326. "Conditionally expand a source block.
  327. Detect if this is context for a org-babel src-block and if so
  328. then run `org-babel-expand-src-block'."
  329. (interactive)
  330. (let ((info (org-babel-get-src-block-info)))
  331. (if info
  332. (progn (org-babel-expand-src-block current-prefix-arg info) t)
  333. nil)))
  334. ;;;###autoload
  335. (defun org-babel-load-in-session-maybe ()
  336. "Conditionally load a source block in a session.
  337. Detect if this is context for a org-babel src-block and if so
  338. then run `org-babel-load-in-session'."
  339. (interactive)
  340. (let ((info (org-babel-get-src-block-info)))
  341. (if info
  342. (progn (org-babel-load-in-session current-prefix-arg info) t)
  343. nil)))
  344. (add-hook 'org-metaup-hook 'org-babel-load-in-session-maybe)
  345. ;;;###autoload
  346. (defun org-babel-pop-to-session-maybe ()
  347. "Conditionally pop to a session.
  348. Detect if this is context for a org-babel src-block and if so
  349. then run `org-babel-pop-to-session'."
  350. (interactive)
  351. (let ((info (org-babel-get-src-block-info)))
  352. (if info (progn (org-babel-pop-to-session current-prefix-arg info) t) nil)))
  353. (add-hook 'org-metadown-hook 'org-babel-pop-to-session-maybe)
  354. (defconst org-babel-common-header-args-w-values
  355. '((cache . ((no yes)))
  356. (cmdline . :any)
  357. (colnames . ((nil no yes)))
  358. (comments . ((no link yes org both noweb)))
  359. (dir . :any)
  360. (eval . ((never query)))
  361. (exports . ((code results both none)))
  362. (file . :any)
  363. (file-desc . :any)
  364. (hlines . ((no yes)))
  365. (mkdirp . ((yes no)))
  366. (no-expand)
  367. (noeval)
  368. (noweb . ((yes no tangle no-export strip-export)))
  369. (noweb-ref . :any)
  370. (noweb-sep . :any)
  371. (padline . ((yes no)))
  372. (results . ((file list vector table scalar verbatim)
  373. (raw org html latex code pp wrap)
  374. (replace silent append prepend)
  375. (output value)))
  376. (rownames . ((no yes)))
  377. (sep . :any)
  378. (session . :any)
  379. (shebang . :any)
  380. (tangle . ((tangle yes no :any)))
  381. (var . :any)
  382. (wrap . :any)))
  383. (defconst org-babel-header-arg-names
  384. (mapcar #'car org-babel-common-header-args-w-values)
  385. "Common header arguments used by org-babel.
  386. Note that individual languages may define their own language
  387. specific header arguments as well.")
  388. (defvar org-babel-default-header-args
  389. '((:session . "none") (:results . "replace") (:exports . "code")
  390. (:cache . "no") (:noweb . "no") (:hlines . "no") (:tangle . "no")
  391. (:padnewline . "yes"))
  392. "Default arguments to use when evaluating a source block.")
  393. (defvar org-babel-default-inline-header-args
  394. '((:session . "none") (:results . "replace") (:exports . "results"))
  395. "Default arguments to use when evaluating an inline source block.")
  396. (defvar org-babel-data-names '("TBLNAME" "RESULTS" "NAME"))
  397. (defvar org-babel-result-regexp
  398. (concat "^[ \t]*#\\+"
  399. (regexp-opt org-babel-data-names t)
  400. "\\(\\[\\([[:alnum:]]+\\)\\]\\)?\\:[ \t]*")
  401. "Regular expression used to match result lines.
  402. If the results are associated with a hash key then the hash will
  403. be saved in the second match data.")
  404. (defvar org-babel-result-w-name-regexp
  405. (concat org-babel-result-regexp
  406. "\\([^ ()\f\t\n\r\v]+\\)\\(\(\\(.*\\)\)\\|\\)"))
  407. (defvar org-babel-min-lines-for-block-output 10
  408. "The minimum number of lines for block output.
  409. If number of lines of output is equal to or exceeds this
  410. value, the output is placed in a #+begin_example...#+end_example
  411. block. Otherwise the output is marked as literal by inserting
  412. colons at the starts of the lines. This variable only takes
  413. effect if the :results output option is in effect.")
  414. (defvar org-babel-noweb-error-langs nil
  415. "Languages for which Babel will raise literate programming errors.
  416. List of languages for which errors should be raised when the
  417. source code block satisfying a noweb reference in this language
  418. can not be resolved.")
  419. (defvar org-babel-hash-show 4
  420. "Number of initial characters to show of a hidden results hash.")
  421. (defvar org-babel-after-execute-hook nil
  422. "Hook for functions to be called after `org-babel-execute-src-block'")
  423. (defun org-babel-named-src-block-regexp-for-name (name)
  424. "This generates a regexp used to match a src block named NAME."
  425. (concat org-babel-src-name-regexp (regexp-quote name)
  426. "\\([ \t]\\|$\\|(\\)" ".*[\r\n]"
  427. (substring org-babel-src-block-regexp 1)))
  428. (defun org-babel-named-data-regexp-for-name (name)
  429. "This generates a regexp used to match data named NAME."
  430. (concat org-babel-result-regexp (regexp-quote name) "\\([ \t]\\|$\\)"))
  431. ;;; functions
  432. (defvar call-process-region)
  433. ;;;###autoload
  434. (defun org-babel-execute-src-block (&optional arg info params)
  435. "Execute the current source code block.
  436. Insert the results of execution into the buffer. Source code
  437. execution and the collection and formatting of results can be
  438. controlled through a variety of header arguments.
  439. With prefix argument ARG, force re-execution even if an existing
  440. result cached in the buffer would otherwise have been returned.
  441. Optionally supply a value for INFO in the form returned by
  442. `org-babel-get-src-block-info'.
  443. Optionally supply a value for PARAMS which will be merged with
  444. the header arguments specified at the front of the source code
  445. block."
  446. (interactive)
  447. (let ((info (or info (org-babel-get-src-block-info))))
  448. (when (org-babel-confirm-evaluate
  449. (let ((i info))
  450. (setf (nth 2 i) (org-babel-merge-params (nth 2 info) params))
  451. i))
  452. (let* ((lang (nth 0 info))
  453. (params (if params
  454. (org-babel-process-params
  455. (org-babel-merge-params (nth 2 info) params))
  456. (nth 2 info)))
  457. (cache? (and (not arg) (cdr (assoc :cache params))
  458. (string= "yes" (cdr (assoc :cache params)))))
  459. (result-params (cdr (assoc :result-params params)))
  460. (new-hash (when cache? (org-babel-sha1-hash info)))
  461. (old-hash (when cache? (org-babel-current-result-hash)))
  462. (body (setf (nth 1 info)
  463. (if (org-babel-noweb-p params :eval)
  464. (org-babel-expand-noweb-references info)
  465. (nth 1 info))))
  466. (dir (cdr (assoc :dir params)))
  467. (default-directory
  468. (or (and dir (file-name-as-directory dir)) default-directory))
  469. (org-babel-call-process-region-original
  470. (if (boundp 'org-babel-call-process-region-original)
  471. org-babel-call-process-region-original
  472. (symbol-function 'call-process-region)))
  473. (indent (car (last info)))
  474. result cmd)
  475. (unwind-protect
  476. (flet ((call-process-region (&rest args)
  477. (apply 'org-babel-tramp-handle-call-process-region args)))
  478. (flet ((lang-check (f)
  479. (let ((f (intern (concat "org-babel-execute:" f))))
  480. (when (fboundp f) f))))
  481. (setq cmd
  482. (or (lang-check lang)
  483. (lang-check (symbol-name
  484. (cdr (assoc lang org-src-lang-modes))))
  485. (error "No org-babel-execute function for %s!" lang))))
  486. (if (and (not arg) new-hash (equal new-hash old-hash))
  487. (save-excursion ;; return cached result
  488. (goto-char (org-babel-where-is-src-block-result nil info))
  489. (end-of-line 1) (forward-char 1)
  490. (setq result (org-babel-read-result))
  491. (message (replace-regexp-in-string
  492. "%" "%%" (format "%S" result))) result)
  493. (message "executing %s code block%s..."
  494. (capitalize lang)
  495. (if (nth 4 info) (format " (%s)" (nth 4 info)) ""))
  496. (setq result
  497. ((lambda (result)
  498. (if (and (eq (cdr (assoc :result-type params)) 'value)
  499. (or (member "vector" result-params)
  500. (member "table" result-params))
  501. (not (listp result)))
  502. (list (list result)) result))
  503. (funcall cmd body params)))
  504. ;; if non-empty result and :file then write to :file
  505. (when (cdr (assoc :file params))
  506. (when result
  507. (with-temp-file (cdr (assoc :file params))
  508. (insert
  509. (org-babel-format-result
  510. result (cdr (assoc :sep (nth 2 info)))))))
  511. (setq result (cdr (assoc :file params))))
  512. (org-babel-insert-result
  513. result result-params info new-hash indent lang)
  514. (run-hooks 'org-babel-after-execute-hook)
  515. result))
  516. (setq call-process-region 'org-babel-call-process-region-original))))))
  517. (defun org-babel-expand-body:generic (body params &optional var-lines)
  518. "Expand BODY with PARAMS.
  519. Expand a block of code with org-babel according to its header
  520. arguments. This generic implementation of body expansion is
  521. called for languages which have not defined their own specific
  522. org-babel-expand-body:lang function."
  523. (mapconcat #'identity (append var-lines (list body)) "\n"))
  524. ;;;###autoload
  525. (defun org-babel-expand-src-block (&optional arg info params)
  526. "Expand the current source code block.
  527. Expand according to the source code block's header
  528. arguments and pop open the results in a preview buffer."
  529. (interactive)
  530. (let* ((info (or info (org-babel-get-src-block-info)))
  531. (lang (nth 0 info))
  532. (params (setf (nth 2 info)
  533. (sort (org-babel-merge-params (nth 2 info) params)
  534. (lambda (el1 el2) (string< (symbol-name (car el1))
  535. (symbol-name (car el2)))))))
  536. (body (setf (nth 1 info)
  537. (if (org-babel-noweb-p params :eval)
  538. (org-babel-expand-noweb-references info) (nth 1 info))))
  539. (expand-cmd (intern (concat "org-babel-expand-body:" lang)))
  540. (assignments-cmd (intern (concat "org-babel-variable-assignments:"
  541. lang)))
  542. (expanded
  543. (if (fboundp expand-cmd) (funcall expand-cmd body params)
  544. (org-babel-expand-body:generic
  545. body params (and (fboundp assignments-cmd)
  546. (funcall assignments-cmd params))))))
  547. (org-edit-src-code
  548. nil expanded (concat "*Org-Babel Preview " (buffer-name) "[ " lang " ]*"))))
  549. (defun org-babel-edit-distance (s1 s2)
  550. "Return the edit (levenshtein) distance between strings S1 S2."
  551. (let* ((l1 (length s1))
  552. (l2 (length s2))
  553. (dist (map 'vector (lambda (_) (make-vector (1+ l2) nil))
  554. (number-sequence 1 (1+ l1)))))
  555. (flet ((in (i j) (aref (aref dist i) j))
  556. (mmin (&rest lst) (apply #'min (remove nil lst))))
  557. (setf (aref (aref dist 0) 0) 0)
  558. (dolist (i (number-sequence 1 l1))
  559. (dolist (j (number-sequence 1 l2))
  560. (setf (aref (aref dist i) j)
  561. (+ (if (equal (aref s1 (1- i)) (aref s2 (1- j))) 0 1)
  562. (mmin (in (1- i) j) (in i (1- j)) (in (1- i) (1- j)))))))
  563. (in l1 l2))))
  564. (defun org-babel-combine-header-arg-lists (original &rest others)
  565. "Combine a number of lists of header argument names and arguments."
  566. (let ((results (copy-sequence original)))
  567. (dolist (new-list others)
  568. (dolist (arg-pair new-list)
  569. (let ((header (car arg-pair))
  570. (args (cdr arg-pair)))
  571. (setq results
  572. (cons arg-pair (org-remove-if
  573. (lambda (pair) (equal header (car pair)))
  574. results))))))
  575. results))
  576. ;;;###autoload
  577. (defun org-babel-check-src-block ()
  578. "Check for misspelled header arguments in the current code block."
  579. (interactive)
  580. ;; TODO: report malformed code block
  581. ;; TODO: report incompatible combinations of header arguments
  582. ;; TODO: report uninitialized variables
  583. (let ((too-close 2) ;; <- control closeness to report potential match
  584. (names (mapcar #'symbol-name org-babel-header-arg-names)))
  585. (dolist (header (mapcar (lambda (arg) (substring (symbol-name (car arg)) 1))
  586. (and (org-babel-where-is-src-block-head)
  587. (org-babel-parse-header-arguments
  588. (org-babel-clean-text-properties
  589. (match-string 4))))))
  590. (dolist (name names)
  591. (when (and (not (string= header name))
  592. (<= (org-babel-edit-distance header name) too-close)
  593. (not (member header names)))
  594. (error "supplied header \"%S\" is suspiciously close to \"%S\""
  595. header name))))
  596. (message "No suspicious header arguments found.")))
  597. ;;;###autoload
  598. (defun org-babel-insert-header-arg ()
  599. "Insert a header argument selecting from lists of common args and values."
  600. (interactive)
  601. (let* ((lang (car (org-babel-get-src-block-info 'light)))
  602. (lang-headers (intern (concat "org-babel-header-args:" lang)))
  603. (headers (org-babel-combine-header-arg-lists
  604. org-babel-common-header-args-w-values
  605. (if (boundp lang-headers) (eval lang-headers) nil)))
  606. (arg (org-icompleting-read
  607. "Header Arg: "
  608. (mapcar
  609. (lambda (header-spec) (symbol-name (car header-spec)))
  610. headers))))
  611. (insert ":" arg)
  612. (let ((vals (cdr (assoc (intern arg) headers))))
  613. (when vals
  614. (insert
  615. " "
  616. (cond
  617. ((eq vals :any)
  618. (read-from-minibuffer "value: "))
  619. ((listp vals)
  620. (mapconcat
  621. (lambda (group)
  622. (let ((arg (org-icompleting-read
  623. "value: "
  624. (cons "default" (mapcar #'symbol-name group)))))
  625. (if (and arg (not (string= "default" arg)))
  626. (concat arg " ")
  627. "")))
  628. vals ""))))))))
  629. ;; Add support for completing-read insertion of header arguments after ":"
  630. (defun org-babel-header-arg-expand ()
  631. "Call `org-babel-enter-header-arg-w-completion' in appropriate contexts."
  632. (when (and (= (char-before) ?\:) (org-babel-where-is-src-block-head))
  633. (org-babel-enter-header-arg-w-completion (match-string 2))))
  634. (defun org-babel-enter-header-arg-w-completion (&optional lang)
  635. "Insert header argument appropriate for LANG with completion."
  636. (let* ((lang-headers-var (intern (concat "org-babel-header-args:" lang)))
  637. (lang-headers (when (boundp lang-headers-var) (eval lang-headers-var)))
  638. (headers-w-values (org-babel-combine-header-arg-lists
  639. org-babel-common-header-args-w-values lang-headers))
  640. (headers (mapcar #'symbol-name (mapcar #'car headers-w-values)))
  641. (header (org-completing-read "Header Arg: " headers))
  642. (args (cdr (assoc (intern header) headers-w-values)))
  643. (arg (when (and args (listp args))
  644. (org-completing-read
  645. (format "%s: " header)
  646. (mapcar #'symbol-name (apply #'append args))))))
  647. (insert (concat header " " (or arg "")))
  648. (cons header arg)))
  649. (add-hook 'org-tab-first-hook 'org-babel-header-arg-expand)
  650. ;;;###autoload
  651. (defun org-babel-load-in-session (&optional arg info)
  652. "Load the body of the current source-code block.
  653. Evaluate the header arguments for the source block before
  654. entering the session. After loading the body this pops open the
  655. session."
  656. (interactive)
  657. (let* ((info (or info (org-babel-get-src-block-info)))
  658. (lang (nth 0 info))
  659. (params (nth 2 info))
  660. (body (setf (nth 1 info)
  661. (if (org-babel-noweb-p params :eval)
  662. (org-babel-expand-noweb-references info)
  663. (nth 1 info))))
  664. (session (cdr (assoc :session params)))
  665. (dir (cdr (assoc :dir params)))
  666. (default-directory
  667. (or (and dir (file-name-as-directory dir)) default-directory))
  668. (cmd (intern (concat "org-babel-load-session:" lang))))
  669. (unless (fboundp cmd)
  670. (error "No org-babel-load-session function for %s!" lang))
  671. (pop-to-buffer (funcall cmd session body params))
  672. (end-of-line 1)))
  673. ;;;###autoload
  674. (defun org-babel-initiate-session (&optional arg info)
  675. "Initiate session for current code block.
  676. If called with a prefix argument then resolve any variable
  677. references in the header arguments and assign these variables in
  678. the session. Copy the body of the code block to the kill ring."
  679. (interactive "P")
  680. (let* ((info (or info (org-babel-get-src-block-info (not arg))))
  681. (lang (nth 0 info))
  682. (body (nth 1 info))
  683. (params (nth 2 info))
  684. (session (cdr (assoc :session params)))
  685. (dir (cdr (assoc :dir params)))
  686. (default-directory
  687. (or (and dir (file-name-as-directory dir)) default-directory))
  688. (init-cmd (intern (format "org-babel-%s-initiate-session" lang)))
  689. (prep-cmd (intern (concat "org-babel-prep-session:" lang))))
  690. (if (and (stringp session) (string= session "none"))
  691. (error "This block is not using a session!"))
  692. (unless (fboundp init-cmd)
  693. (error "No org-babel-initiate-session function for %s!" lang))
  694. (with-temp-buffer (insert (org-babel-trim body))
  695. (copy-region-as-kill (point-min) (point-max)))
  696. (when arg
  697. (unless (fboundp prep-cmd)
  698. (error "No org-babel-prep-session function for %s!" lang))
  699. (funcall prep-cmd session params))
  700. (funcall init-cmd session params)))
  701. ;;;###autoload
  702. (defun org-babel-switch-to-session (&optional arg info)
  703. "Switch to the session of the current code block.
  704. Uses `org-babel-initiate-session' to start the session. If called
  705. with a prefix argument then this is passed on to
  706. `org-babel-initiate-session'."
  707. (interactive "P")
  708. (pop-to-buffer (org-babel-initiate-session arg info))
  709. (end-of-line 1))
  710. (defalias 'org-babel-pop-to-session 'org-babel-switch-to-session)
  711. ;;;###autoload
  712. (defun org-babel-switch-to-session-with-code (&optional arg info)
  713. "Switch to code buffer and display session."
  714. (interactive "P")
  715. (flet ((swap-windows
  716. ()
  717. (let ((other-window-buffer (window-buffer (next-window))))
  718. (set-window-buffer (next-window) (current-buffer))
  719. (set-window-buffer (selected-window) other-window-buffer))
  720. (other-window 1)))
  721. (let ((info (org-babel-get-src-block-info))
  722. (org-src-window-setup 'reorganize-frame))
  723. (save-excursion
  724. (org-babel-switch-to-session arg info))
  725. (org-edit-src-code))
  726. (swap-windows)))
  727. (defmacro org-babel-do-in-edit-buffer (&rest body)
  728. "Evaluate BODY in edit buffer if there is a code block at point.
  729. Return t if a code block was found at point, nil otherwise."
  730. `(let ((org-src-window-setup 'switch-invisibly))
  731. (when (and (org-babel-where-is-src-block-head)
  732. (org-edit-src-code nil nil nil))
  733. (unwind-protect (progn ,@body)
  734. (if (org-bound-and-true-p org-edit-src-from-org-mode)
  735. (org-edit-src-exit)))
  736. t)))
  737. (def-edebug-spec org-babel-do-in-edit-buffer (body))
  738. (defun org-babel-do-key-sequence-in-edit-buffer (key)
  739. "Read key sequence and execute the command in edit buffer.
  740. Enter a key sequence to be executed in the language major-mode
  741. edit buffer. For example, TAB will alter the contents of the
  742. Org-mode code block according to the effect of TAB in the
  743. language major-mode buffer. For languages that support
  744. interactive sessions, this can be used to send code from the Org
  745. buffer to the session for evaluation using the native major-mode
  746. evaluation mechanisms."
  747. (interactive "kEnter key-sequence to execute in edit buffer: ")
  748. (org-babel-do-in-edit-buffer
  749. (call-interactively
  750. (key-binding (or key (read-key-sequence nil))))))
  751. (defvar org-bracket-link-regexp)
  752. ;;;###autoload
  753. (defun org-babel-open-src-block-result (&optional re-run)
  754. "If `point' is on a src block then open the results of the
  755. source code block, otherwise return nil. With optional prefix
  756. argument RE-RUN the source-code block is evaluated even if
  757. results already exist."
  758. (interactive "P")
  759. (let ((info (org-babel-get-src-block-info)))
  760. (when info
  761. (save-excursion
  762. ;; go to the results, if there aren't any then run the block
  763. (goto-char (or (and (not re-run) (org-babel-where-is-src-block-result))
  764. (progn (org-babel-execute-src-block)
  765. (org-babel-where-is-src-block-result))))
  766. (end-of-line 1)
  767. (while (looking-at "[\n\r\t\f ]") (forward-char 1))
  768. ;; open the results
  769. (if (looking-at org-bracket-link-regexp)
  770. ;; file results
  771. (org-open-at-point)
  772. (let ((r (org-babel-format-result
  773. (org-babel-read-result) (cdr (assoc :sep (nth 2 info))))))
  774. (pop-to-buffer (get-buffer-create "*Org-Babel Results*"))
  775. (delete-region (point-min) (point-max))
  776. (insert r)))
  777. t))))
  778. ;;;###autoload
  779. (defmacro org-babel-map-src-blocks (file &rest body)
  780. "Evaluate BODY forms on each source-block in FILE.
  781. If FILE is nil evaluate BODY forms on source blocks in current
  782. buffer. During evaluation of BODY the following local variables
  783. are set relative to the currently matched code block.
  784. full-block ------- string holding the entirety of the code block
  785. beg-block -------- point at the beginning of the code block
  786. end-block -------- point at the end of the matched code block
  787. lang ------------- string holding the language of the code block
  788. beg-lang --------- point at the beginning of the lang
  789. end-lang --------- point at the end of the lang
  790. switches --------- string holding the switches
  791. beg-switches ----- point at the beginning of the switches
  792. end-switches ----- point at the end of the switches
  793. header-args ------ string holding the header-args
  794. beg-header-args -- point at the beginning of the header-args
  795. end-header-args -- point at the end of the header-args
  796. body ------------- string holding the body of the code block
  797. beg-body --------- point at the beginning of the body
  798. end-body --------- point at the end of the body"
  799. (declare (indent 1))
  800. (let ((tempvar (make-symbol "file")))
  801. `(let* ((,tempvar ,file)
  802. (visited-p (or (null ,tempvar)
  803. (get-file-buffer (expand-file-name ,tempvar))))
  804. (point (point)) to-be-removed)
  805. (save-window-excursion
  806. (when ,tempvar (find-file ,tempvar))
  807. (setq to-be-removed (current-buffer))
  808. (goto-char (point-min))
  809. (while (re-search-forward org-babel-src-block-regexp nil t)
  810. (goto-char (match-beginning 0))
  811. (let ((full-block (match-string 0))
  812. (beg-block (match-beginning 0))
  813. (end-block (match-end 0))
  814. (lang (match-string 2))
  815. (beg-lang (match-beginning 2))
  816. (end-lang (match-end 2))
  817. (switches (match-string 3))
  818. (beg-switches (match-beginning 3))
  819. (end-switches (match-end 3))
  820. (header-args (match-string 4))
  821. (beg-header-args (match-beginning 4))
  822. (end-header-args (match-end 4))
  823. (body (match-string 5))
  824. (beg-body (match-beginning 5))
  825. (end-body (match-end 5)))
  826. ,@body
  827. (goto-char end-block))))
  828. (unless visited-p (kill-buffer to-be-removed))
  829. (goto-char point))))
  830. (def-edebug-spec org-babel-map-src-blocks (form body))
  831. ;;;###autoload
  832. (defmacro org-babel-map-inline-src-blocks (file &rest body)
  833. "Evaluate BODY forms on each inline source-block in FILE.
  834. If FILE is nil evaluate BODY forms on source blocks in current
  835. buffer."
  836. (declare (indent 1))
  837. (let ((tempvar (make-symbol "file")))
  838. `(let* ((,tempvar ,file)
  839. (visited-p (or (null ,tempvar)
  840. (get-file-buffer (expand-file-name ,tempvar))))
  841. (point (point)) to-be-removed)
  842. (save-window-excursion
  843. (when ,tempvar (find-file ,tempvar))
  844. (setq to-be-removed (current-buffer))
  845. (goto-char (point-min))
  846. (while (re-search-forward org-babel-inline-src-block-regexp nil t)
  847. (goto-char (match-beginning 1))
  848. (save-match-data ,@body)
  849. (goto-char (match-end 0))))
  850. (unless visited-p (kill-buffer to-be-removed))
  851. (goto-char point))))
  852. (def-edebug-spec org-babel-map-inline-src-blocks (form body))
  853. (defvar org-babel-lob-one-liner-regexp)
  854. ;;;###autoload
  855. (defmacro org-babel-map-call-lines (file &rest body)
  856. "Evaluate BODY forms on each call line in FILE.
  857. If FILE is nil evaluate BODY forms on source blocks in current
  858. buffer."
  859. (declare (indent 1))
  860. (let ((tempvar (make-symbol "file")))
  861. `(let* ((,tempvar ,file)
  862. (visited-p (or (null ,tempvar)
  863. (get-file-buffer (expand-file-name ,tempvar))))
  864. (point (point)) to-be-removed)
  865. (save-window-excursion
  866. (when ,tempvar (find-file ,tempvar))
  867. (setq to-be-removed (current-buffer))
  868. (goto-char (point-min))
  869. (while (re-search-forward org-babel-lob-one-liner-regexp nil t)
  870. (goto-char (match-beginning 1))
  871. (save-match-data ,@body)
  872. (goto-char (match-end 0))))
  873. (unless visited-p (kill-buffer to-be-removed))
  874. (goto-char point))))
  875. (def-edebug-spec org-babel-map-call-lines (form body))
  876. ;;;###autoload
  877. (defmacro org-babel-map-executables (file &rest body)
  878. (declare (indent 1))
  879. (let ((tempvar (make-symbol "file"))
  880. (rx (make-symbol "rx")))
  881. `(let* ((,tempvar ,file)
  882. (,rx (concat "\\(" org-babel-src-block-regexp
  883. "\\|" org-babel-inline-src-block-regexp
  884. "\\|" org-babel-lob-one-liner-regexp "\\)"))
  885. (visited-p (or (null ,tempvar)
  886. (get-file-buffer (expand-file-name ,tempvar))))
  887. (point (point)) to-be-removed)
  888. (save-window-excursion
  889. (when ,tempvar (find-file ,tempvar))
  890. (setq to-be-removed (current-buffer))
  891. (goto-char (point-min))
  892. (while (re-search-forward ,rx nil t)
  893. (goto-char (match-beginning 1))
  894. (when (looking-at org-babel-inline-src-block-regexp)(forward-char 1))
  895. (save-match-data ,@body)
  896. (goto-char (match-end 0))))
  897. (unless visited-p (kill-buffer to-be-removed))
  898. (goto-char point))))
  899. (def-edebug-spec org-babel-map-executables (form body))
  900. ;;;###autoload
  901. (defun org-babel-execute-buffer (&optional arg)
  902. "Execute source code blocks in a buffer.
  903. Call `org-babel-execute-src-block' on every source block in
  904. the current buffer."
  905. (interactive "P")
  906. (org-babel-eval-wipe-error-buffer)
  907. (org-save-outline-visibility t
  908. (org-babel-map-executables nil
  909. (if (looking-at org-babel-lob-one-liner-regexp)
  910. (org-babel-lob-execute-maybe)
  911. (org-babel-execute-src-block arg)))))
  912. ;;;###autoload
  913. (defun org-babel-execute-subtree (&optional arg)
  914. "Execute source code blocks in a subtree.
  915. Call `org-babel-execute-src-block' on every source block in
  916. the current subtree."
  917. (interactive "P")
  918. (save-restriction
  919. (save-excursion
  920. (org-narrow-to-subtree)
  921. (org-babel-execute-buffer arg)
  922. (widen))))
  923. ;;;###autoload
  924. (defun org-babel-sha1-hash (&optional info)
  925. "Generate an sha1 hash based on the value of info."
  926. (interactive)
  927. (let ((print-level nil)
  928. (info (or info (org-babel-get-src-block-info))))
  929. (setf (nth 2 info)
  930. (sort (copy-sequence (nth 2 info))
  931. (lambda (a b) (string< (car a) (car b)))))
  932. (labels ((rm (lst)
  933. (dolist (p '("replace" "silent" "append" "prepend"))
  934. (setq lst (remove p lst)))
  935. lst)
  936. (norm (arg)
  937. (let ((v (if (and (listp (cdr arg)) (null (cddr arg)))
  938. (copy-sequence (cdr arg))
  939. (cdr arg))))
  940. (when (and v (not (and (sequencep v)
  941. (not (consp v))
  942. (= (length v) 0))))
  943. (cond
  944. ((and (listp v) ; lists are sorted
  945. (member (car arg) '(:result-params)))
  946. (sort (rm v) #'string<))
  947. ((and (stringp v) ; strings are sorted
  948. (member (car arg) '(:results :exports)))
  949. (mapconcat #'identity (sort (rm (split-string v))
  950. #'string<) " "))
  951. (t v))))))
  952. ((lambda (hash)
  953. (when (org-called-interactively-p 'interactive) (message hash)) hash)
  954. (let ((it (format "%s-%s"
  955. (mapconcat
  956. #'identity
  957. (delq nil (mapcar (lambda (arg)
  958. (let ((normalized (norm arg)))
  959. (when normalized
  960. (format "%S" normalized))))
  961. (nth 2 info))) ":")
  962. (nth 1 info))))
  963. (sha1 it))))))
  964. (defun org-babel-current-result-hash ()
  965. "Return the in-buffer hash associated with INFO."
  966. (org-babel-where-is-src-block-result)
  967. (org-babel-clean-text-properties (match-string 3)))
  968. (defun org-babel-hide-hash ()
  969. "Hide the hash in the current results line.
  970. Only the initial `org-babel-hash-show' characters of the hash
  971. will remain visible."
  972. (add-to-invisibility-spec '(org-babel-hide-hash . t))
  973. (save-excursion
  974. (when (and (re-search-forward org-babel-result-regexp nil t)
  975. (match-string 3))
  976. (let* ((start (match-beginning 3))
  977. (hide-start (+ org-babel-hash-show start))
  978. (end (match-end 3))
  979. (hash (match-string 3))
  980. ov1 ov2)
  981. (setq ov1 (make-overlay start hide-start))
  982. (setq ov2 (make-overlay hide-start end))
  983. (overlay-put ov2 'invisible 'org-babel-hide-hash)
  984. (overlay-put ov1 'babel-hash hash)))))
  985. (defun org-babel-hide-all-hashes ()
  986. "Hide the hash in the current buffer.
  987. Only the initial `org-babel-hash-show' characters of each hash
  988. will remain visible. This function should be called as part of
  989. the `org-mode-hook'."
  990. (save-excursion
  991. (while (re-search-forward org-babel-result-regexp nil t)
  992. (goto-char (match-beginning 0))
  993. (org-babel-hide-hash)
  994. (goto-char (match-end 0)))))
  995. (add-hook 'org-mode-hook 'org-babel-hide-all-hashes)
  996. (defun org-babel-hash-at-point (&optional point)
  997. "Return the value of the hash at POINT.
  998. The hash is also added as the last element of the kill ring.
  999. This can be called with C-c C-c."
  1000. (interactive)
  1001. (let ((hash (car (delq nil (mapcar
  1002. (lambda (ol) (overlay-get ol 'babel-hash))
  1003. (overlays-at (or point (point))))))))
  1004. (when hash (kill-new hash) (message hash))))
  1005. (add-hook 'org-ctrl-c-ctrl-c-hook 'org-babel-hash-at-point)
  1006. (defun org-babel-result-hide-spec ()
  1007. "Hide portions of results lines.
  1008. Add `org-babel-hide-result' as an invisibility spec for hiding
  1009. portions of results lines."
  1010. (add-to-invisibility-spec '(org-babel-hide-result . t)))
  1011. (add-hook 'org-mode-hook 'org-babel-result-hide-spec)
  1012. (defvar org-babel-hide-result-overlays nil
  1013. "Overlays hiding results.")
  1014. (defun org-babel-result-hide-all ()
  1015. "Fold all results in the current buffer."
  1016. (interactive)
  1017. (org-babel-show-result-all)
  1018. (save-excursion
  1019. (while (re-search-forward org-babel-result-regexp nil t)
  1020. (save-excursion (goto-char (match-beginning 0))
  1021. (org-babel-hide-result-toggle-maybe)))))
  1022. (defun org-babel-show-result-all ()
  1023. "Unfold all results in the current buffer."
  1024. (mapc 'delete-overlay org-babel-hide-result-overlays)
  1025. (setq org-babel-hide-result-overlays nil))
  1026. ;;;###autoload
  1027. (defun org-babel-hide-result-toggle-maybe ()
  1028. "Toggle visibility of result at point."
  1029. (interactive)
  1030. (let ((case-fold-search t))
  1031. (if (save-excursion
  1032. (beginning-of-line 1)
  1033. (looking-at org-babel-result-regexp))
  1034. (progn (org-babel-hide-result-toggle)
  1035. t) ;; to signal that we took action
  1036. nil))) ;; to signal that we did not
  1037. (defun org-babel-hide-result-toggle (&optional force)
  1038. "Toggle the visibility of the current result."
  1039. (interactive)
  1040. (save-excursion
  1041. (beginning-of-line)
  1042. (if (re-search-forward org-babel-result-regexp nil t)
  1043. (let ((start (progn (beginning-of-line 2) (- (point) 1)))
  1044. (end (progn
  1045. (while (looking-at org-babel-multi-line-header-regexp)
  1046. (forward-line 1))
  1047. (goto-char (- (org-babel-result-end) 1)) (point)))
  1048. ov)
  1049. (if (memq t (mapcar (lambda (overlay)
  1050. (eq (overlay-get overlay 'invisible)
  1051. 'org-babel-hide-result))
  1052. (overlays-at start)))
  1053. (if (or (not force) (eq force 'off))
  1054. (mapc (lambda (ov)
  1055. (when (member ov org-babel-hide-result-overlays)
  1056. (setq org-babel-hide-result-overlays
  1057. (delq ov org-babel-hide-result-overlays)))
  1058. (when (eq (overlay-get ov 'invisible)
  1059. 'org-babel-hide-result)
  1060. (delete-overlay ov)))
  1061. (overlays-at start)))
  1062. (setq ov (make-overlay start end))
  1063. (overlay-put ov 'invisible 'org-babel-hide-result)
  1064. ;; make the block accessible to isearch
  1065. (overlay-put
  1066. ov 'isearch-open-invisible
  1067. (lambda (ov)
  1068. (when (member ov org-babel-hide-result-overlays)
  1069. (setq org-babel-hide-result-overlays
  1070. (delq ov org-babel-hide-result-overlays)))
  1071. (when (eq (overlay-get ov 'invisible)
  1072. 'org-babel-hide-result)
  1073. (delete-overlay ov))))
  1074. (push ov org-babel-hide-result-overlays)))
  1075. (error "Not looking at a result line"))))
  1076. ;; org-tab-after-check-for-cycling-hook
  1077. (add-hook 'org-tab-first-hook 'org-babel-hide-result-toggle-maybe)
  1078. ;; Remove overlays when changing major mode
  1079. (add-hook 'org-mode-hook
  1080. (lambda () (org-add-hook 'change-major-mode-hook
  1081. 'org-babel-show-result-all 'append 'local)))
  1082. (defvar org-file-properties)
  1083. (defun org-babel-params-from-properties (&optional lang)
  1084. "Retrieve parameters specified as properties.
  1085. Return an association list of any source block params which
  1086. may be specified in the properties of the current outline entry."
  1087. (save-match-data
  1088. (let (val sym)
  1089. (org-babel-parse-multiple-vars
  1090. (delq nil
  1091. (mapcar
  1092. (lambda (header-arg)
  1093. (and (setq val (org-entry-get (point) header-arg t))
  1094. (cons (intern (concat ":" header-arg))
  1095. (org-babel-read val))))
  1096. (mapcar
  1097. #'symbol-name
  1098. (mapcar
  1099. #'car
  1100. (org-babel-combine-header-arg-lists
  1101. org-babel-common-header-args-w-values
  1102. (progn
  1103. (setq sym (intern (concat "org-babel-header-args:" lang)))
  1104. (and (boundp sym) (eval sym))))))))))))
  1105. (defvar org-src-preserve-indentation)
  1106. (defun org-babel-parse-src-block-match ()
  1107. "Parse the results from a match of the `org-babel-src-block-regexp'."
  1108. (let* ((block-indentation (length (match-string 1)))
  1109. (lang (org-babel-clean-text-properties (match-string 2)))
  1110. (lang-headers (intern (concat "org-babel-default-header-args:" lang)))
  1111. (switches (match-string 3))
  1112. (body (org-babel-clean-text-properties
  1113. (let* ((body (match-string 5))
  1114. (sub-length (- (length body) 1)))
  1115. (if (and (> sub-length 0)
  1116. (string= "\n" (substring body sub-length)))
  1117. (substring body 0 sub-length)
  1118. (or body "")))))
  1119. (preserve-indentation (or org-src-preserve-indentation
  1120. (string-match "-i\\>" switches))))
  1121. (list lang
  1122. ;; get block body less properties, protective commas, and indentation
  1123. (with-temp-buffer
  1124. (save-match-data
  1125. (insert (org-babel-strip-protective-commas body lang))
  1126. (unless preserve-indentation (org-do-remove-indentation))
  1127. (buffer-string)))
  1128. (org-babel-merge-params
  1129. org-babel-default-header-args
  1130. (org-babel-params-from-properties lang)
  1131. (if (boundp lang-headers) (eval lang-headers) nil)
  1132. (org-babel-parse-header-arguments
  1133. (org-babel-clean-text-properties (or (match-string 4) ""))))
  1134. switches
  1135. block-indentation)))
  1136. (defun org-babel-parse-inline-src-block-match ()
  1137. "Parse the results from a match of the `org-babel-inline-src-block-regexp'."
  1138. (let* ((lang (org-babel-clean-text-properties (match-string 2)))
  1139. (lang-headers (intern (concat "org-babel-default-header-args:" lang))))
  1140. (list lang
  1141. (org-babel-strip-protective-commas
  1142. (org-babel-clean-text-properties (match-string 5)) lang)
  1143. (org-babel-merge-params
  1144. org-babel-default-inline-header-args
  1145. (org-babel-params-from-properties lang)
  1146. (if (boundp lang-headers) (eval lang-headers) nil)
  1147. (org-babel-parse-header-arguments
  1148. (org-babel-clean-text-properties (or (match-string 4) "")))))))
  1149. (defun org-babel-balanced-split (string alts)
  1150. "Split STRING on instances of ALTS.
  1151. ALTS is a cons of two character options where each option may be
  1152. either the numeric code of a single character or a list of
  1153. character alternatives. For example to split on balanced
  1154. instances of \"[ \t]:\" set ALTS to '((32 9) . 58)."
  1155. (flet ((matches (ch spec) (if (listp spec) (member ch spec) (equal spec ch)))
  1156. (matched (ch last)
  1157. (if (consp alts)
  1158. (and (matches ch (cdr alts))
  1159. (matches last (car alts)))
  1160. (matches ch alts))))
  1161. (let ((balance 0) (quote nil) (partial nil) (lst nil) (last 0))
  1162. (mapc (lambda (ch) ; split on [], (), "" balanced instances of [ \t]:
  1163. (setq balance (+ balance
  1164. (cond ((or (equal 91 ch) (equal 40 ch)) 1)
  1165. ((or (equal 93 ch) (equal 41 ch)) -1)
  1166. (t 0))))
  1167. (when (and (equal 34 ch) (not (equal 92 last)))
  1168. (setq quote (not quote)))
  1169. (setq partial (cons ch partial))
  1170. (when (and (= balance 0) (not quote) (matched ch last))
  1171. (setq lst (cons (apply #'string (nreverse
  1172. (if (consp alts)
  1173. (cddr partial)
  1174. (cdr partial))))
  1175. lst))
  1176. (setq partial nil))
  1177. (setq last ch))
  1178. (string-to-list string))
  1179. (nreverse (cons (apply #'string (nreverse partial)) lst)))))
  1180. (defun org-babel-join-splits-near-ch (ch list)
  1181. "Join splits where \"=\" is on either end of the split."
  1182. (flet ((last= (str) (= ch (aref str (1- (length str)))))
  1183. (first= (str) (= ch (aref str 0))))
  1184. (reverse
  1185. (org-reduce (lambda (acc el)
  1186. (let ((head (car acc)))
  1187. (if (and head (or (last= head) (first= el)))
  1188. (cons (concat head el) (cdr acc))
  1189. (cons el acc))))
  1190. list :initial-value nil))))
  1191. (defun org-babel-parse-header-arguments (arg-string)
  1192. "Parse a string of header arguments returning an alist."
  1193. (when (> (length arg-string) 0)
  1194. (org-babel-parse-multiple-vars
  1195. (delq nil
  1196. (mapcar
  1197. (lambda (arg)
  1198. (if (string-match
  1199. "\\([^ \f\t\n\r\v]+\\)[ \f\t\n\r\v]+\\([^ \f\t\n\r\v]+.*\\)"
  1200. arg)
  1201. (cons (intern (match-string 1 arg))
  1202. (org-babel-read (org-babel-chomp (match-string 2 arg))))
  1203. (cons (intern (org-babel-chomp arg)) nil)))
  1204. ((lambda (raw)
  1205. (cons (car raw) (mapcar (lambda (r) (concat ":" r)) (cdr raw))))
  1206. (org-babel-balanced-split arg-string '((32 9) . 58))))))))
  1207. (defun org-babel-parse-multiple-vars (header-arguments)
  1208. "Expand multiple variable assignments behind a single :var keyword.
  1209. This allows expression of multiple variables with one :var as
  1210. shown below.
  1211. #+PROPERTY: var foo=1, bar=2"
  1212. (let (results)
  1213. (mapc (lambda (pair)
  1214. (if (eq (car pair) :var)
  1215. (mapcar (lambda (v) (push (cons :var (org-babel-trim v)) results))
  1216. (org-babel-join-splits-near-ch
  1217. 61 (org-babel-balanced-split (cdr pair) 32)))
  1218. (push pair results)))
  1219. header-arguments)
  1220. (nreverse results)))
  1221. (defun org-babel-process-params (params)
  1222. "Expand variables in PARAMS and add summary parameters."
  1223. (let* ((processed-vars (mapcar (lambda (el)
  1224. (if (consp (cdr el))
  1225. (cdr el)
  1226. (org-babel-ref-parse (cdr el))))
  1227. (org-babel-get-header params :var)))
  1228. (vars-and-names (if (and (assoc :colname-names params)
  1229. (assoc :rowname-names params))
  1230. (list processed-vars)
  1231. (org-babel-disassemble-tables
  1232. processed-vars
  1233. (cdr (assoc :hlines params))
  1234. (cdr (assoc :colnames params))
  1235. (cdr (assoc :rownames params)))))
  1236. (raw-result (or (cdr (assoc :results params)) ""))
  1237. (result-params (append
  1238. (split-string (if (stringp raw-result)
  1239. raw-result
  1240. (eval raw-result)))
  1241. (cdr (assoc :result-params params)))))
  1242. (append
  1243. (mapcar (lambda (var) (cons :var var)) (car vars-and-names))
  1244. (list
  1245. (cons :colname-names (or (cdr (assoc :colname-names params))
  1246. (cadr vars-and-names)))
  1247. (cons :rowname-names (or (cdr (assoc :rowname-names params))
  1248. (caddr vars-and-names)))
  1249. (cons :result-params result-params)
  1250. (cons :result-type (cond ((member "output" result-params) 'output)
  1251. ((member "value" result-params) 'value)
  1252. (t 'value))))
  1253. (org-babel-get-header params :var 'other))))
  1254. ;; row and column names
  1255. (defun org-babel-del-hlines (table)
  1256. "Remove all 'hlines from TABLE."
  1257. (remove 'hline table))
  1258. (defun org-babel-get-colnames (table)
  1259. "Return the column names of TABLE.
  1260. Return a cons cell, the `car' of which contains the TABLE less
  1261. colnames, and the `cdr' of which contains a list of the column
  1262. names."
  1263. (if (equal 'hline (nth 1 table))
  1264. (cons (cddr table) (car table))
  1265. (cons (cdr table) (car table))))
  1266. (defun org-babel-get-rownames (table)
  1267. "Return the row names of TABLE.
  1268. Return a cons cell, the `car' of which contains the TABLE less
  1269. colnames, and the `cdr' of which contains a list of the column
  1270. names. Note: this function removes any hlines in TABLE."
  1271. (flet ((trans (table) (apply #'mapcar* #'list table)))
  1272. (let* ((width (apply 'max
  1273. (mapcar (lambda (el) (if (listp el) (length el) 0)) table)))
  1274. (table (trans (mapcar (lambda (row)
  1275. (if (not (equal row 'hline))
  1276. row
  1277. (setq row '())
  1278. (dotimes (n width)
  1279. (setq row (cons 'hline row)))
  1280. row))
  1281. table))))
  1282. (cons (mapcar (lambda (row) (if (equal (car row) 'hline) 'hline row))
  1283. (trans (cdr table)))
  1284. (remove 'hline (car table))))))
  1285. (defun org-babel-put-colnames (table colnames)
  1286. "Add COLNAMES to TABLE if they exist."
  1287. (if colnames (apply 'list colnames 'hline table) table))
  1288. (defun org-babel-put-rownames (table rownames)
  1289. "Add ROWNAMES to TABLE if they exist."
  1290. (if rownames
  1291. (mapcar (lambda (row)
  1292. (if (listp row)
  1293. (cons (or (pop rownames) "") row)
  1294. row)) table)
  1295. table))
  1296. (defun org-babel-pick-name (names selector)
  1297. "Select one out of an alist of row or column names.
  1298. SELECTOR can be either a list of names in which case those names
  1299. will be returned directly, or an index into the list NAMES in
  1300. which case the indexed names will be return."
  1301. (if (listp selector)
  1302. selector
  1303. (when names
  1304. (if (and selector (symbolp selector) (not (equal t selector)))
  1305. (cdr (assoc selector names))
  1306. (if (integerp selector)
  1307. (nth (- selector 1) names)
  1308. (cdr (car (last names))))))))
  1309. (defun org-babel-disassemble-tables (vars hlines colnames rownames)
  1310. "Parse tables for further processing.
  1311. Process the variables in VARS according to the HLINES,
  1312. ROWNAMES and COLNAMES header arguments. Return a list consisting
  1313. of the vars, cnames and rnames."
  1314. (let (cnames rnames)
  1315. (list
  1316. (mapcar
  1317. (lambda (var)
  1318. (when (listp (cdr var))
  1319. (when (and (not (equal colnames "no"))
  1320. (or colnames (and (equal (nth 1 (cdr var)) 'hline)
  1321. (not (member 'hline (cddr (cdr var)))))))
  1322. (let ((both (org-babel-get-colnames (cdr var))))
  1323. (setq cnames (cons (cons (car var) (cdr both))
  1324. cnames))
  1325. (setq var (cons (car var) (car both)))))
  1326. (when (and rownames (not (equal rownames "no")))
  1327. (let ((both (org-babel-get-rownames (cdr var))))
  1328. (setq rnames (cons (cons (car var) (cdr both))
  1329. rnames))
  1330. (setq var (cons (car var) (car both)))))
  1331. (when (and hlines (not (equal hlines "yes")))
  1332. (setq var (cons (car var) (org-babel-del-hlines (cdr var))))))
  1333. var)
  1334. vars)
  1335. (reverse cnames) (reverse rnames))))
  1336. (defun org-babel-reassemble-table (table colnames rownames)
  1337. "Add column and row names to a table.
  1338. Given a TABLE and set of COLNAMES and ROWNAMES add the names
  1339. to the table for reinsertion to org-mode."
  1340. (if (listp table)
  1341. ((lambda (table)
  1342. (if (and colnames (listp (car table)) (= (length (car table))
  1343. (length colnames)))
  1344. (org-babel-put-colnames table colnames) table))
  1345. (if (and rownames (= (length table) (length rownames)))
  1346. (org-babel-put-rownames table rownames) table))
  1347. table))
  1348. (defun org-babel-where-is-src-block-head ()
  1349. "Find where the current source block begins.
  1350. Return the point at the beginning of the current source
  1351. block. Specifically at the beginning of the #+BEGIN_SRC line.
  1352. If the point is not on a source block then return nil."
  1353. (let ((initial (point)) top bottom)
  1354. (or
  1355. (save-excursion ;; on a source name line or a #+header line
  1356. (beginning-of-line 1)
  1357. (and (or (looking-at org-babel-src-name-regexp)
  1358. (looking-at org-babel-multi-line-header-regexp))
  1359. (progn
  1360. (while (and (forward-line 1)
  1361. (looking-at org-babel-multi-line-header-regexp)))
  1362. (looking-at org-babel-src-block-regexp))
  1363. (point)))
  1364. (save-excursion ;; on a #+begin_src line
  1365. (beginning-of-line 1)
  1366. (and (looking-at org-babel-src-block-regexp)
  1367. (point)))
  1368. (save-excursion ;; inside a src block
  1369. (and
  1370. (re-search-backward "^[ \t]*#\\+begin_src" nil t) (setq top (point))
  1371. (re-search-forward "^[ \t]*#\\+end_src" nil t) (setq bottom (point))
  1372. (< top initial) (< initial bottom)
  1373. (progn (goto-char top) (beginning-of-line 1)
  1374. (looking-at org-babel-src-block-regexp))
  1375. (point))))))
  1376. ;;;###autoload
  1377. (defun org-babel-goto-src-block-head ()
  1378. "Go to the beginning of the current code block."
  1379. (interactive)
  1380. ((lambda (head)
  1381. (if head (goto-char head) (error "not currently in a code block")))
  1382. (org-babel-where-is-src-block-head)))
  1383. ;;;###autoload
  1384. (defun org-babel-goto-named-src-block (name)
  1385. "Go to a named source-code block."
  1386. (interactive
  1387. (let ((completion-ignore-case t)
  1388. (under-point (thing-at-point 'line)))
  1389. (list (org-icompleting-read
  1390. "source-block name: " (org-babel-src-block-names) nil t
  1391. (cond
  1392. ;; noweb
  1393. ((string-match (org-babel-noweb-wrap) under-point)
  1394. (let ((block-name (match-string 1 under-point)))
  1395. (string-match "[^(]*" block-name)
  1396. (match-string 0 block-name)))
  1397. ;; #+call:
  1398. ((string-match org-babel-lob-one-liner-regexp under-point)
  1399. (let ((source-info (car (org-babel-lob-get-info))))
  1400. (if (string-match "^\\([^\\[]+?\\)\\(\\[.*\\]\\)?(" source-info)
  1401. (let ((source-name (match-string 1 source-info)))
  1402. source-name))))
  1403. ;; #+results:
  1404. ((string-match (concat "#\\+" org-babel-results-keyword
  1405. "\\:\s+\\([^\\(]*\\)") under-point)
  1406. (match-string 1 under-point))
  1407. ;; symbol-at-point
  1408. ((and (thing-at-point 'symbol))
  1409. (org-babel-find-named-block (thing-at-point 'symbol))
  1410. (thing-at-point 'symbol))
  1411. (""))))))
  1412. (let ((point (org-babel-find-named-block name)))
  1413. (if point
  1414. ;; taken from `org-open-at-point'
  1415. (progn (org-mark-ring-push) (goto-char point) (org-show-context))
  1416. (message "source-code block '%s' not found in this buffer" name))))
  1417. (defun org-babel-find-named-block (name)
  1418. "Find a named source-code block.
  1419. Return the location of the source block identified by source
  1420. NAME, or nil if no such block exists. Set match data according to
  1421. org-babel-named-src-block-regexp."
  1422. (save-excursion
  1423. (let ((case-fold-search t)
  1424. (regexp (org-babel-named-src-block-regexp-for-name name)) msg)
  1425. (goto-char (point-min))
  1426. (when (or (re-search-forward regexp nil t)
  1427. (re-search-backward regexp nil t))
  1428. (match-beginning 0)))))
  1429. (defun org-babel-src-block-names (&optional file)
  1430. "Returns the names of source blocks in FILE or the current buffer."
  1431. (save-excursion
  1432. (when file (find-file file)) (goto-char (point-min))
  1433. (let (names)
  1434. (while (re-search-forward org-babel-src-name-w-name-regexp nil t)
  1435. (setq names (cons (match-string 3) names)))
  1436. names)))
  1437. ;;;###autoload
  1438. (defun org-babel-goto-named-result (name)
  1439. "Go to a named result."
  1440. (interactive
  1441. (let ((completion-ignore-case t))
  1442. (list (org-icompleting-read "source-block name: "
  1443. (org-babel-result-names) nil t))))
  1444. (let ((point (org-babel-find-named-result name)))
  1445. (if point
  1446. ;; taken from `org-open-at-point'
  1447. (progn (goto-char point) (org-show-context))
  1448. (message "result '%s' not found in this buffer" name))))
  1449. (defun org-babel-find-named-result (name &optional point)
  1450. "Find a named result.
  1451. Return the location of the result named NAME in the current
  1452. buffer or nil if no such result exists."
  1453. (save-excursion
  1454. (goto-char (or point (point-min)))
  1455. (catch 'is-a-code-block
  1456. (when (re-search-forward
  1457. (concat org-babel-result-regexp
  1458. "[ \t]" (regexp-quote name) "[ \t\n\f\v\r]+") nil t)
  1459. (when (and (string= "name" (downcase (match-string 1)))
  1460. (or (beginning-of-line 1)
  1461. (looking-at org-babel-src-block-regexp)
  1462. (looking-at org-babel-multi-line-header-regexp)))
  1463. (throw 'is-a-code-block (org-babel-find-named-result name (point))))
  1464. (beginning-of-line 0) (point)))))
  1465. (defun org-babel-result-names (&optional file)
  1466. "Returns the names of results in FILE or the current buffer."
  1467. (save-excursion
  1468. (when file (find-file file)) (goto-char (point-min))
  1469. (let (names)
  1470. (while (re-search-forward org-babel-result-w-name-regexp nil t)
  1471. (setq names (cons (match-string 4) names)))
  1472. names)))
  1473. ;;;###autoload
  1474. (defun org-babel-next-src-block (&optional arg)
  1475. "Jump to the next source block.
  1476. With optional prefix argument ARG, jump forward ARG many source blocks."
  1477. (interactive "P")
  1478. (when (looking-at org-babel-src-block-regexp) (forward-char 1))
  1479. (condition-case nil
  1480. (re-search-forward org-babel-src-block-regexp nil nil (or arg 1))
  1481. (error (error "No further code blocks")))
  1482. (goto-char (match-beginning 0)) (org-show-context))
  1483. ;;;###autoload
  1484. (defun org-babel-previous-src-block (&optional arg)
  1485. "Jump to the previous source block.
  1486. With optional prefix argument ARG, jump backward ARG many source blocks."
  1487. (interactive "P")
  1488. (condition-case nil
  1489. (re-search-backward org-babel-src-block-regexp nil nil (or arg 1))
  1490. (error (error "No previous code blocks")))
  1491. (goto-char (match-beginning 0)) (org-show-context))
  1492. (defvar org-babel-load-languages)
  1493. ;;;###autoload
  1494. (defun org-babel-mark-block ()
  1495. "Mark current src block"
  1496. (interactive)
  1497. ((lambda (head)
  1498. (when head
  1499. (save-excursion
  1500. (goto-char head)
  1501. (looking-at org-babel-src-block-regexp))
  1502. (push-mark (match-end 5) nil t)
  1503. (goto-char (match-beginning 5))))
  1504. (org-babel-where-is-src-block-head)))
  1505. (defun org-babel-demarcate-block (&optional arg)
  1506. "Wrap or split the code in the region or on the point.
  1507. When called from inside of a code block the current block is
  1508. split. When called from outside of a code block a new code block
  1509. is created. In both cases if the region is demarcated and if the
  1510. region is not active then the point is demarcated."
  1511. (interactive "P")
  1512. (let ((info (org-babel-get-src-block-info 'light))
  1513. (headers (progn (org-babel-where-is-src-block-head)
  1514. (match-string 4)))
  1515. (stars (concat (make-string (or (org-current-level) 1) ?*) " ")))
  1516. (if info
  1517. (mapc
  1518. (lambda (place)
  1519. (save-excursion
  1520. (goto-char place)
  1521. (let ((lang (nth 0 info))
  1522. (indent (make-string (nth 5 info) ? )))
  1523. (when (string-match "^[[:space:]]*$"
  1524. (buffer-substring (point-at-bol)
  1525. (point-at-eol)))
  1526. (delete-region (point-at-bol) (point-at-eol)))
  1527. (insert (concat
  1528. (if (looking-at "^") "" "\n")
  1529. indent "#+end_src\n"
  1530. (if arg stars indent) "\n"
  1531. indent "#+begin_src " lang
  1532. (if (> (length headers) 1)
  1533. (concat " " headers) headers)
  1534. (if (looking-at "[\n\r]")
  1535. ""
  1536. (concat "\n" (make-string (current-column) ? )))))))
  1537. (move-end-of-line 2))
  1538. (sort (if (region-active-p) (list (mark) (point)) (list (point))) #'>))
  1539. (let ((start (point))
  1540. (lang (org-icompleting-read "Lang: "
  1541. (mapcar (lambda (el) (symbol-name (car el)))
  1542. org-babel-load-languages)))
  1543. (body (delete-and-extract-region
  1544. (if (region-active-p) (mark) (point)) (point))))
  1545. (insert (concat (if (looking-at "^") "" "\n")
  1546. (if arg (concat stars "\n") "")
  1547. "#+begin_src " lang "\n"
  1548. body
  1549. (if (or (= (length body) 0)
  1550. (string-match "[\r\n]$" body)) "" "\n")
  1551. "#+end_src\n"))
  1552. (goto-char start) (move-end-of-line 1)))))
  1553. (defvar org-babel-lob-one-liner-regexp)
  1554. (defun org-babel-where-is-src-block-result (&optional insert info hash indent)
  1555. "Find where the current source block results begin.
  1556. Return the point at the beginning of the result of the current
  1557. source block. Specifically at the beginning of the results line.
  1558. If no result exists for this block then create a results line
  1559. following the source block."
  1560. (save-excursion
  1561. (let* ((on-lob-line (save-excursion
  1562. (beginning-of-line 1)
  1563. (looking-at org-babel-lob-one-liner-regexp)))
  1564. (inlinep (when (org-babel-get-inline-src-block-matches)
  1565. (match-end 0)))
  1566. (name (if on-lob-line
  1567. (mapconcat #'identity (butlast (org-babel-lob-get-info)) "")
  1568. (nth 4 (or info (org-babel-get-src-block-info 'light)))))
  1569. (head (unless on-lob-line (org-babel-where-is-src-block-head)))
  1570. found beg end)
  1571. (when head (goto-char head))
  1572. (setq
  1573. found ;; was there a result (before we potentially insert one)
  1574. (or
  1575. inlinep
  1576. (and
  1577. ;; named results:
  1578. ;; - return t if it is found, else return nil
  1579. ;; - if it does not need to be rebuilt, then don't set end
  1580. ;; - if it does need to be rebuilt then do set end
  1581. name (setq beg (org-babel-find-named-result name))
  1582. (prog1 beg
  1583. (when (and hash (not (string= hash (match-string 3))))
  1584. (goto-char beg) (setq end beg) ;; beginning of result
  1585. (forward-line 1)
  1586. (delete-region end (org-babel-result-end)) nil)))
  1587. (and
  1588. ;; unnamed results:
  1589. ;; - return t if it is found, else return nil
  1590. ;; - if it is found, and the hash doesn't match, delete and set end
  1591. (or on-lob-line (re-search-forward "^[ \t]*#\\+end_src" nil t))
  1592. (progn (end-of-line 1)
  1593. (if (eobp) (insert "\n") (forward-char 1))
  1594. (setq end (point))
  1595. (or (and (not name)
  1596. (progn ;; unnamed results line already exists
  1597. (re-search-forward "[^ \f\t\n\r\v]" nil t)
  1598. (beginning-of-line 1)
  1599. (looking-at
  1600. (concat org-babel-result-regexp "\n")))
  1601. (prog1 (point)
  1602. ;; must remove and rebuild if hash!=old-hash
  1603. (if (and hash (not (string= hash (match-string 3))))
  1604. (prog1 nil
  1605. (forward-line 1)
  1606. (delete-region
  1607. end (org-babel-result-end)))
  1608. (setq end nil)))))))))
  1609. (if (and insert end)
  1610. (progn
  1611. (goto-char end)
  1612. (unless beg
  1613. (if (looking-at "[\n\r]") (forward-char 1) (insert "\n")))
  1614. (insert (concat
  1615. (if indent
  1616. (mapconcat
  1617. (lambda (el) " ")
  1618. (org-number-sequence 1 indent) "")
  1619. "")
  1620. "#+" org-babel-results-keyword
  1621. (when hash (concat "["hash"]"))
  1622. ":"
  1623. (when name (concat " " name)) "\n"))
  1624. (unless beg (insert "\n") (backward-char))
  1625. (beginning-of-line 0)
  1626. (if hash (org-babel-hide-hash))
  1627. (point))
  1628. found))))
  1629. (defvar org-block-regexp)
  1630. (defun org-babel-read-result ()
  1631. "Read the result at `point' into emacs-lisp."
  1632. (let ((case-fold-search t) result-string)
  1633. (cond
  1634. ((org-at-table-p) (org-babel-read-table))
  1635. ((org-at-item-p) (org-babel-read-list))
  1636. ((looking-at org-bracket-link-regexp) (org-babel-read-link))
  1637. ((looking-at org-block-regexp) (org-babel-trim (match-string 4)))
  1638. ((looking-at "^[ \t]*: ")
  1639. (setq result-string
  1640. (org-babel-trim
  1641. (mapconcat (lambda (line)
  1642. (if (and (> (length line) 1)
  1643. (string-match "^[ \t]*: \\(.+\\)" line))
  1644. (match-string 1 line)
  1645. line))
  1646. (split-string
  1647. (buffer-substring
  1648. (point) (org-babel-result-end)) "[\r\n]+")
  1649. "\n")))
  1650. (or (org-babel-number-p result-string) result-string))
  1651. ((looking-at org-babel-result-regexp)
  1652. (save-excursion (forward-line 1) (org-babel-read-result))))))
  1653. (defun org-babel-read-table ()
  1654. "Read the table at `point' into emacs-lisp."
  1655. (mapcar (lambda (row)
  1656. (if (and (symbolp row) (equal row 'hline)) row
  1657. (mapcar (lambda (el) (org-babel-read el 'inhibit-lisp-eval)) row)))
  1658. (org-table-to-lisp)))
  1659. (defun org-babel-read-list ()
  1660. "Read the list at `point' into emacs-lisp."
  1661. (mapcar (lambda (el) (org-babel-read el 'inhibit-lisp-eval))
  1662. (mapcar #'cadr (cdr (org-list-parse-list)))))
  1663. (defvar org-link-types-re)
  1664. (defun org-babel-read-link ()
  1665. "Read the link at `point' into emacs-lisp.
  1666. If the path of the link is a file path it is expanded using
  1667. `expand-file-name'."
  1668. (let* ((case-fold-search t)
  1669. (raw (and (looking-at org-bracket-link-regexp)
  1670. (org-babel-clean-text-properties (match-string 1))))
  1671. (type (and (string-match org-link-types-re raw)
  1672. (match-string 1 raw))))
  1673. (cond
  1674. ((not type) (expand-file-name raw))
  1675. ((string= type "file")
  1676. (and (string-match "file\\(.*\\):\\(.+\\)" raw)
  1677. (expand-file-name (match-string 2 raw))))
  1678. (t raw))))
  1679. (defun org-babel-format-result (result &optional sep)
  1680. "Format RESULT for writing to file."
  1681. (flet ((echo-res (result)
  1682. (if (stringp result) result (format "%S" result))))
  1683. (if (listp result)
  1684. ;; table result
  1685. (orgtbl-to-generic
  1686. result
  1687. (list
  1688. :sep (or sep "\t")
  1689. :fmt 'echo-res))
  1690. ;; scalar result
  1691. (echo-res result))))
  1692. (defun org-babel-insert-result
  1693. (result &optional result-params info hash indent lang)
  1694. "Insert RESULT into the current buffer.
  1695. By default RESULT is inserted after the end of the
  1696. current source block. With optional argument RESULT-PARAMS
  1697. controls insertion of results in the org-mode file.
  1698. RESULT-PARAMS can take the following values...
  1699. replace - (default option) insert results after the source block
  1700. replacing any previously inserted results
  1701. silent -- no results are inserted
  1702. file ---- the results are interpreted as a file path, and are
  1703. inserted into the buffer using the Org-mode file syntax
  1704. list ---- the results are interpreted as an Org-mode list.
  1705. raw ----- results are added directly to the Org-mode file. This
  1706. is a good option if you code block will output org-mode
  1707. formatted text.
  1708. wrap ---- results are added directly to the Org-mode file as with
  1709. \"raw\", but are wrapped in a RESULTS drawer, allowing
  1710. them to later be replaced or removed automatically.
  1711. org ----- similar in effect to raw, only the results are wrapped
  1712. in an org code block. Similar to the raw option, on
  1713. export the results will be interpreted as org-formatted
  1714. text, however by wrapping the results in an org code
  1715. block they can be replaced upon re-execution of the
  1716. code block.
  1717. html ---- results are added inside of a #+BEGIN_HTML block. This
  1718. is a good option if you code block will output html
  1719. formatted text.
  1720. latex --- results are added inside of a #+BEGIN_LATEX block.
  1721. This is a good option if you code block will output
  1722. latex formatted text.
  1723. code ---- the results are extracted in the syntax of the source
  1724. code of the language being evaluated and are added
  1725. inside of a #+BEGIN_SRC block with the source-code
  1726. language set appropriately. Note this relies on the
  1727. optional LANG argument."
  1728. (if (stringp result)
  1729. (progn
  1730. (setq result (org-babel-clean-text-properties result))
  1731. (when (member "file" result-params)
  1732. (setq result (org-babel-result-to-file
  1733. result (when (assoc :file-desc (nth 2 info))
  1734. (or (cdr (assoc :file-desc (nth 2 info)))
  1735. result))))))
  1736. (unless (listp result) (setq result (format "%S" result))))
  1737. (if (and result-params (member "silent" result-params))
  1738. (progn
  1739. (message (replace-regexp-in-string "%" "%%" (format "%S" result)))
  1740. result)
  1741. (save-excursion
  1742. (let* ((inlinep
  1743. (save-excursion
  1744. (when (or (org-babel-get-inline-src-block-matches)
  1745. (org-babel-get-lob-one-liner-matches))
  1746. (goto-char (match-end 0))
  1747. (insert (if (listp result) "\n" " "))
  1748. (point))))
  1749. (existing-result (unless inlinep
  1750. (org-babel-where-is-src-block-result
  1751. t info hash indent)))
  1752. (results-switches
  1753. (cdr (assoc :results_switches (nth 2 info))))
  1754. beg end)
  1755. (when (and (stringp result) ; ensure results end in a newline
  1756. (not inlinep)
  1757. (> (length result) 0)
  1758. (not (or (string-equal (substring result -1) "\n")
  1759. (string-equal (substring result -1) "\r"))))
  1760. (setq result (concat result "\n")))
  1761. (if (not existing-result)
  1762. (setq beg (or inlinep (point)))
  1763. (goto-char existing-result)
  1764. (save-excursion
  1765. (re-search-forward "#" nil t)
  1766. (setq indent (- (current-column) 1)))
  1767. (forward-line 1)
  1768. (setq beg (point))
  1769. (cond
  1770. ((member "replace" result-params)
  1771. (delete-region (point) (org-babel-result-end)))
  1772. ((member "append" result-params)
  1773. (goto-char (org-babel-result-end)) (setq beg (point-marker)))
  1774. ((member "prepend" result-params)))) ; already there
  1775. (setq results-switches
  1776. (if results-switches (concat " " results-switches) ""))
  1777. (flet ((wrap (start finish)
  1778. (goto-char end) (insert (concat finish "\n"))
  1779. (goto-char beg) (insert (concat start "\n"))
  1780. (goto-char end) (goto-char (point-at-eol))
  1781. (setq end (point-marker)))
  1782. (proper-list-p (it) (and (listp it) (null (cdr (last it))))))
  1783. ;; insert results based on type
  1784. (cond
  1785. ;; do nothing for an empty result
  1786. ((null result))
  1787. ;; insert a list if preferred
  1788. ((member "list" result-params)
  1789. (insert
  1790. (org-babel-trim
  1791. (org-list-to-generic
  1792. (cons 'unordered
  1793. (mapcar
  1794. (lambda (el) (list nil (if (stringp el) el (format "%S" el))))
  1795. (if (listp result) result (list result))))
  1796. '(:splicep nil :istart "- " :iend "\n")))
  1797. "\n"))
  1798. ;; assume the result is a table if it's not a string
  1799. ((proper-list-p result)
  1800. (goto-char beg)
  1801. (insert (concat (orgtbl-to-orgtbl
  1802. (if (or (eq 'hline (car result))
  1803. (and (listp (car result))
  1804. (listp (cdr (car result)))))
  1805. result (list result))
  1806. '(:fmt (lambda (cell) (format "%s" cell)))) "\n"))
  1807. (goto-char beg) (when (org-at-table-p) (org-table-align)))
  1808. ((and (listp result) (not (proper-list-p result)))
  1809. (insert (format "%s\n" result)))
  1810. ((member "file" result-params)
  1811. (when inlinep (goto-char inlinep))
  1812. (insert result))
  1813. (t (goto-char beg) (insert result)))
  1814. (when (proper-list-p result) (goto-char (org-table-end)))
  1815. (setq end (point-marker))
  1816. ;; possibly wrap result
  1817. (cond
  1818. ((assoc :wrap (nth 2 info))
  1819. (let ((name (or (cdr (assoc :wrap (nth 2 info))) "RESULTS")))
  1820. (wrap (concat "#+BEGIN_" name) (concat "#+END_" name))))
  1821. ((member "html" result-params)
  1822. (wrap "#+BEGIN_HTML" "#+END_HTML"))
  1823. ((member "latex" result-params)
  1824. (wrap "#+BEGIN_LaTeX" "#+END_LaTeX"))
  1825. ((member "code" result-params)
  1826. (wrap (format "#+BEGIN_SRC %s%s" (or lang "none") results-switches)
  1827. "#+END_SRC"))
  1828. ((member "org" result-params)
  1829. (wrap "#+BEGIN_ORG" "#+END_ORG"))
  1830. ((member "raw" result-params)
  1831. (goto-char beg) (if (org-at-table-p) (org-cycle)))
  1832. ((member "wrap" result-params)
  1833. (wrap ":RESULTS:" ":END:"))
  1834. ((and (not (proper-list-p result))
  1835. (not (member "file" result-params)))
  1836. (org-babel-examplize-region beg end results-switches)
  1837. (setq end (point)))))
  1838. ;; possibly indent the results to match the #+results line
  1839. (when (and (not inlinep) (numberp indent) indent (> indent 0)
  1840. ;; in this case `table-align' does the work for us
  1841. (not (and (listp result)
  1842. (member "append" result-params))))
  1843. (indent-rigidly beg end indent))))
  1844. (if (null result)
  1845. (if (member "value" result-params)
  1846. (message "Code block returned no value.")
  1847. (message "Code block produced no output."))
  1848. (message "Code block evaluation complete."))))
  1849. (defun org-babel-remove-result (&optional info)
  1850. "Remove the result of the current source block."
  1851. (interactive)
  1852. (let ((location (org-babel-where-is-src-block-result nil info)) start)
  1853. (when location
  1854. (setq start (- location 1))
  1855. (save-excursion
  1856. (goto-char location) (forward-line 1)
  1857. (delete-region start (org-babel-result-end))))))
  1858. (defun org-babel-result-end ()
  1859. "Return the point at the end of the current set of results"
  1860. (save-excursion
  1861. (cond
  1862. ((org-at-table-p) (progn (goto-char (org-table-end)) (point)))
  1863. ((org-at-item-p) (let* ((struct (org-list-struct))
  1864. (prvs (org-list-prevs-alist struct)))
  1865. (org-list-get-list-end (point-at-bol) struct prvs)))
  1866. ((looking-at "^\\([ \t]*\\):RESULTS:")
  1867. (progn (re-search-forward (concat "^" (match-string 1) ":END:"))
  1868. (forward-char 1) (point)))
  1869. (t
  1870. (let ((case-fold-search t))
  1871. (if (looking-at (concat "[ \t]*#\\+begin_\\([^ \t\n\r]+\\)"))
  1872. (progn (re-search-forward (concat "[ \t]*#\\+end_" (match-string 1))
  1873. nil t)
  1874. (forward-char 1))
  1875. (while (looking-at "[ \t]*\\(: \\|\\[\\[\\)")
  1876. (forward-line 1))))
  1877. (point)))))
  1878. (defun org-babel-result-to-file (result &optional description)
  1879. "Convert RESULT into an `org-mode' link with optional DESCRIPTION.
  1880. If the `default-directory' is different from the containing
  1881. file's directory then expand relative links."
  1882. (when (stringp result)
  1883. (format "[[file:%s]%s]"
  1884. (if (and default-directory
  1885. buffer-file-name
  1886. (not (string= (expand-file-name default-directory)
  1887. (expand-file-name
  1888. (file-name-directory buffer-file-name)))))
  1889. (expand-file-name result default-directory)
  1890. result)
  1891. (if description (concat "[" description "]") ""))))
  1892. (defun org-babel-examplize-region (beg end &optional results-switches)
  1893. "Comment out region using the inline '==' or ': ' org example quote."
  1894. (interactive "*r")
  1895. (flet ((chars-between (b e)
  1896. (not (string-match "^[\\s]*$" (buffer-substring b e)))))
  1897. (if (or (chars-between (save-excursion (goto-char beg) (point-at-bol)) beg)
  1898. (chars-between end (save-excursion (goto-char end) (point-at-eol))))
  1899. (save-excursion
  1900. (goto-char beg)
  1901. (insert (format "=%s=" (prog1 (buffer-substring beg end)
  1902. (delete-region beg end)))))
  1903. (let ((size (count-lines beg end)))
  1904. (save-excursion
  1905. (cond ((= size 0)) ; do nothing for an empty result
  1906. ((< size org-babel-min-lines-for-block-output)
  1907. (goto-char beg)
  1908. (dotimes (n size)
  1909. (beginning-of-line 1) (insert ": ") (forward-line 1)))
  1910. (t
  1911. (goto-char beg)
  1912. (insert (if results-switches
  1913. (format "#+begin_example%s\n" results-switches)
  1914. "#+begin_example\n"))
  1915. (if (markerp end) (goto-char end) (forward-char (- end beg)))
  1916. (insert "#+end_example\n"))))))))
  1917. (defun org-babel-update-block-body (new-body)
  1918. "Update the body of the current code block to NEW-BODY."
  1919. (if (not (org-babel-where-is-src-block-head))
  1920. (error "not in source block")
  1921. (save-match-data
  1922. (replace-match (concat (org-babel-trim new-body) "\n") nil t nil 5))
  1923. (indent-rigidly (match-beginning 5) (match-end 5) 2)))
  1924. (defun org-babel-merge-params (&rest plists)
  1925. "Combine all parameter association lists in PLISTS.
  1926. Later elements of PLISTS override the values of previous elements.
  1927. This takes into account some special considerations for certain
  1928. parameters when merging lists."
  1929. (let ((results-exclusive-groups
  1930. (mapcar (lambda (group) (mapcar #'symbol-name group))
  1931. (cdr (assoc 'results org-babel-common-header-args-w-values))))
  1932. (exports-exclusive-groups
  1933. (mapcar (lambda (group) (mapcar #'symbol-name group))
  1934. (cdr (assoc 'exports org-babel-common-header-args-w-values))))
  1935. (variable-index 0)
  1936. params results exports tangle noweb cache vars shebang comments padline)
  1937. (flet ((e-merge (exclusive-groups &rest result-params)
  1938. ;; maintain exclusivity of mutually exclusive parameters
  1939. (let (output)
  1940. (mapc (lambda (new-params)
  1941. (mapc (lambda (new-param)
  1942. (mapc (lambda (exclusive-group)
  1943. (when (member new-param exclusive-group)
  1944. (mapcar (lambda (excluded-param)
  1945. (setq output
  1946. (delete
  1947. excluded-param
  1948. output)))
  1949. exclusive-group)))
  1950. exclusive-groups)
  1951. (setq output (org-uniquify
  1952. (cons new-param output))))
  1953. new-params))
  1954. result-params)
  1955. output)))
  1956. (mapc
  1957. (lambda (plist)
  1958. (mapc
  1959. (lambda (pair)
  1960. (case (car pair)
  1961. (:var
  1962. (let ((name (if (listp (cdr pair))
  1963. (cadr pair)
  1964. (and (string-match "^\\([^= \f\t\n\r\v]+\\)[ \t]*="
  1965. (cdr pair))
  1966. (intern (match-string 1 (cdr pair)))))))
  1967. (if name
  1968. (setq vars
  1969. (append
  1970. (if (member name (mapcar #'car vars))
  1971. (delq nil
  1972. (mapcar
  1973. (lambda (p)
  1974. (unless (equal (car p) name) p))
  1975. vars))
  1976. vars)
  1977. (list (cons name pair))))
  1978. ;; if no name is given and we already have named variables
  1979. ;; then assign to named variables in order
  1980. (if (and vars (nth variable-index vars))
  1981. (prog1 (setf (cddr (nth variable-index vars))
  1982. (concat (symbol-name
  1983. (car (nth variable-index vars)))
  1984. "=" (cdr pair)))
  1985. (incf variable-index))
  1986. (error "variable \"%s\" must be assigned a default value"
  1987. (cdr pair))))))
  1988. (:results
  1989. (setq results (e-merge results-exclusive-groups
  1990. results
  1991. (split-string
  1992. (let ((r (cdr pair)))
  1993. (if (stringp r) r (eval r)))))))
  1994. (:file
  1995. (when (cdr pair)
  1996. (setq results (e-merge results-exclusive-groups
  1997. results '("file")))
  1998. (unless (or (member "both" exports)
  1999. (member "none" exports)
  2000. (member "code" exports))
  2001. (setq exports (e-merge exports-exclusive-groups
  2002. exports '("results"))))
  2003. (setq params (cons pair (assq-delete-all (car pair) params)))))
  2004. (:exports
  2005. (setq exports (e-merge exports-exclusive-groups
  2006. exports (split-string (cdr pair)))))
  2007. (:tangle ;; take the latest -- always overwrite
  2008. (setq tangle (or (list (cdr pair)) tangle)))
  2009. (:noweb
  2010. (setq noweb (e-merge
  2011. '(("yes" "no" "tangle" "no-export"
  2012. "strip-export" "eval"))
  2013. noweb
  2014. (split-string (or (cdr pair) "")))))
  2015. (:cache
  2016. (setq cache (e-merge '(("yes" "no")) cache
  2017. (split-string (or (cdr pair) "")))))
  2018. (:padline
  2019. (setq padline (e-merge '(("yes" "no")) padline
  2020. (split-string (or (cdr pair) "")))))
  2021. (:shebang ;; take the latest -- always overwrite
  2022. (setq shebang (or (list (cdr pair)) shebang)))
  2023. (:comments
  2024. (setq comments (e-merge '(("yes" "no")) comments
  2025. (split-string (or (cdr pair) "")))))
  2026. (t ;; replace: this covers e.g. :session
  2027. (setq params (cons pair (assq-delete-all (car pair) params))))))
  2028. plist))
  2029. plists))
  2030. (setq vars (reverse vars))
  2031. (while vars (setq params (cons (cons :var (cddr (pop vars))) params)))
  2032. (mapc
  2033. (lambda (hd)
  2034. (let ((key (intern (concat ":" (symbol-name hd))))
  2035. (val (eval hd)))
  2036. (setf params (cons (cons key (mapconcat 'identity val " ")) params))))
  2037. '(results exports tangle noweb padline cache shebang comments))
  2038. params))
  2039. (defvar *org-babel-use-quick-and-dirty-noweb-expansion* nil
  2040. "Set to true to use regular expressions to expand noweb references.
  2041. This results in much faster noweb reference expansion but does
  2042. not properly allow code blocks to inherit the \":noweb-ref\"
  2043. header argument from buffer or subtree wide properties.")
  2044. (defun org-babel-noweb-p (params context)
  2045. "Check if PARAMS require expansion in CONTEXT.
  2046. CONTEXT may be one of :tangle, :export or :eval."
  2047. (flet ((intersect (as bs)
  2048. (when as
  2049. (if (member (car as) bs)
  2050. (car as)
  2051. (intersect (cdr as) bs)))))
  2052. (intersect (case context
  2053. (:tangle '("yes" "tangle" "no-export" "strip-export"))
  2054. (:eval '("yes" "no-export" "strip-export" "eval"))
  2055. (:export '("yes")))
  2056. (split-string (or (cdr (assoc :noweb params)) "")))))
  2057. (defun org-babel-expand-noweb-references (&optional info parent-buffer)
  2058. "Expand Noweb references in the body of the current source code block.
  2059. For example the following reference would be replaced with the
  2060. body of the source-code block named 'example-block'.
  2061. <<example-block>>
  2062. Note that any text preceding the <<foo>> construct on a line will
  2063. be interposed between the lines of the replacement text. So for
  2064. example if <<foo>> is placed behind a comment, then the entire
  2065. replacement text will also be commented.
  2066. This function must be called from inside of the buffer containing
  2067. the source-code block which holds BODY.
  2068. In addition the following syntax can be used to insert the
  2069. results of evaluating the source-code block named 'example-block'.
  2070. <<example-block()>>
  2071. Any optional arguments can be passed to example-block by placing
  2072. the arguments inside the parenthesis following the convention
  2073. defined by `org-babel-lob'. For example
  2074. <<example-block(a=9)>>
  2075. would set the value of argument \"a\" equal to \"9\". Note that
  2076. these arguments are not evaluated in the current source-code
  2077. block but are passed literally to the \"example-block\"."
  2078. (let* ((parent-buffer (or parent-buffer (current-buffer)))
  2079. (info (or info (org-babel-get-src-block-info)))
  2080. (lang (nth 0 info))
  2081. (body (nth 1 info))
  2082. (comment (string= "noweb" (cdr (assoc :comments (nth 2 info)))))
  2083. (rx-prefix (concat "\\(" org-babel-src-name-regexp "\\|"
  2084. ":noweb-ref[ \t]+" "\\)"))
  2085. (new-body "") index source-name evaluate prefix blocks-in-buffer)
  2086. (flet ((nb-add (text) (setq new-body (concat new-body text)))
  2087. (c-wrap (text)
  2088. (with-temp-buffer
  2089. (funcall (intern (concat lang "-mode")))
  2090. (comment-region (point) (progn (insert text) (point)))
  2091. (org-babel-trim (buffer-string)))))
  2092. (with-temp-buffer
  2093. (insert body) (goto-char (point-min))
  2094. (setq index (point))
  2095. (while (and (re-search-forward (org-babel-noweb-wrap) nil t))
  2096. (save-match-data (setf source-name (match-string 1)))
  2097. (save-match-data (setq evaluate (string-match "\(.*\)" source-name)))
  2098. (save-match-data
  2099. (setq prefix
  2100. (buffer-substring (match-beginning 0)
  2101. (save-excursion
  2102. (beginning-of-line 1) (point)))))
  2103. ;; add interval to new-body (removing noweb reference)
  2104. (goto-char (match-beginning 0))
  2105. (nb-add (buffer-substring index (point)))
  2106. (goto-char (match-end 0))
  2107. (setq index (point))
  2108. (nb-add
  2109. (with-current-buffer parent-buffer
  2110. (save-restriction
  2111. (widen)
  2112. (mapconcat ;; interpose PREFIX between every line
  2113. #'identity
  2114. (split-string
  2115. (if evaluate
  2116. (let ((raw (org-babel-ref-resolve source-name)))
  2117. (if (stringp raw) raw (format "%S" raw)))
  2118. (or
  2119. ;; retrieve from the library of babel
  2120. (nth 2 (assoc (intern source-name)
  2121. org-babel-library-of-babel))
  2122. ;; return the contents of headlines literally
  2123. (save-excursion
  2124. (when (org-babel-ref-goto-headline-id source-name)
  2125. (org-babel-ref-headline-body)))
  2126. ;; find the expansion of reference in this buffer
  2127. (let ((rx (concat rx-prefix source-name "[ \t\n]"))
  2128. expansion)
  2129. (save-excursion
  2130. (goto-char (point-min))
  2131. (if *org-babel-use-quick-and-dirty-noweb-expansion*
  2132. (while (re-search-forward rx nil t)
  2133. (let* ((i (org-babel-get-src-block-info 'light))
  2134. (body (org-babel-expand-noweb-references i))
  2135. (sep (or (cdr (assoc :noweb-sep (nth 2 i)))
  2136. "\n"))
  2137. (full (if comment
  2138. ((lambda (cs)
  2139. (concat (c-wrap (car cs)) "\n"
  2140. body "\n"
  2141. (c-wrap (cadr cs))))
  2142. (org-babel-tangle-comment-links i))
  2143. body)))
  2144. (setq expansion (cons sep (cons full expansion)))))
  2145. (org-babel-map-src-blocks nil
  2146. (let ((i (org-babel-get-src-block-info 'light)))
  2147. (when (equal (or (cdr (assoc :noweb-ref (nth 2 i)))
  2148. (nth 4 i))
  2149. source-name)
  2150. (let* ((body (org-babel-expand-noweb-references i))
  2151. (sep (or (cdr (assoc :noweb-sep (nth 2 i)))
  2152. "\n"))
  2153. (full (if comment
  2154. ((lambda (cs)
  2155. (concat (c-wrap (car cs)) "\n"
  2156. body "\n"
  2157. (c-wrap (cadr cs))))
  2158. (org-babel-tangle-comment-links i))
  2159. body)))
  2160. (setq expansion
  2161. (cons sep (cons full expansion)))))))))
  2162. (and expansion
  2163. (mapconcat #'identity (nreverse (cdr expansion)) "")))
  2164. ;; possibly raise an error if named block doesn't exist
  2165. (if (member lang org-babel-noweb-error-langs)
  2166. (error "%s" (concat
  2167. (org-babel-noweb-wrap source-name)
  2168. "could not be resolved (see "
  2169. "`org-babel-noweb-error-langs')"))
  2170. "")))
  2171. "[\n\r]") (concat "\n" prefix))))))
  2172. (nb-add (buffer-substring index (point-max)))))
  2173. new-body))
  2174. (defun org-babel-clean-text-properties (text)
  2175. "Strip all properties from text return."
  2176. (when text
  2177. (set-text-properties 0 (length text) nil text) text))
  2178. (defun org-babel-strip-protective-commas (body &optional lang)
  2179. "Strip protective commas from bodies of source blocks."
  2180. (with-temp-buffer
  2181. (insert body)
  2182. (if (and lang (string= lang "org"))
  2183. (progn (goto-char (point-min))
  2184. (while (re-search-forward "^[ \t]*\\(,\\)" nil t)
  2185. (replace-match "" nil nil nil 1)))
  2186. (org-strip-protective-commas (point-min) (point-max)))
  2187. (buffer-string)))
  2188. (defun org-babel-script-escape (str &optional force)
  2189. "Safely convert tables into elisp lists."
  2190. (let (in-single in-double out)
  2191. ((lambda (escaped) (condition-case nil (org-babel-read escaped) (error escaped)))
  2192. (if (or force
  2193. (and (stringp str)
  2194. (> (length str) 2)
  2195. (or (and (string-equal "[" (substring str 0 1))
  2196. (string-equal "]" (substring str -1)))
  2197. (and (string-equal "{" (substring str 0 1))
  2198. (string-equal "}" (substring str -1)))
  2199. (and (string-equal "(" (substring str 0 1))
  2200. (string-equal ")" (substring str -1))))))
  2201. (org-babel-read
  2202. (concat
  2203. "'"
  2204. (progn
  2205. (mapc
  2206. (lambda (ch)
  2207. (setq
  2208. out
  2209. (case ch
  2210. (91 (if (or in-double in-single) ; [
  2211. (cons 91 out)
  2212. (cons 40 out)))
  2213. (93 (if (or in-double in-single) ; ]
  2214. (cons 93 out)
  2215. (cons 41 out)))
  2216. (123 (if (or in-double in-single) ; {
  2217. (cons 123 out)
  2218. (cons 40 out)))
  2219. (125 (if (or in-double in-single) ; }
  2220. (cons 125 out)
  2221. (cons 41 out)))
  2222. (44 (if (or in-double in-single) ; ,
  2223. (cons 44 out) (cons 32 out)))
  2224. (39 (if in-double ; '
  2225. (cons 39 out)
  2226. (setq in-single (not in-single)) (cons 34 out)))
  2227. (34 (if in-single ; "
  2228. (append (list 34 32) out)
  2229. (setq in-double (not in-double)) (cons 34 out)))
  2230. (t (cons ch out)))))
  2231. (string-to-list str))
  2232. (apply #'string (reverse out)))))
  2233. str))))
  2234. (defun org-babel-read (cell &optional inhibit-lisp-eval)
  2235. "Convert the string value of CELL to a number if appropriate.
  2236. Otherwise if cell looks like lisp (meaning it starts with a
  2237. \"(\", \"'\", \"`\" or a \"[\") then read it as lisp, otherwise
  2238. return it unmodified as a string. Optional argument NO-LISP-EVAL
  2239. inhibits lisp evaluation for situations in which is it not
  2240. appropriate."
  2241. (if (and (stringp cell) (not (equal cell "")))
  2242. (or (org-babel-number-p cell)
  2243. (if (and (not inhibit-lisp-eval)
  2244. (member (substring cell 0 1) '("(" "'" "`" "[")))
  2245. (eval (read cell))
  2246. (if (string= (substring cell 0 1) "\"")
  2247. (read cell)
  2248. (progn (set-text-properties 0 (length cell) nil cell) cell))))
  2249. cell))
  2250. (defun org-babel-number-p (string)
  2251. "If STRING represents a number return its value."
  2252. (if (and (string-match "^-?[0-9]*\\.?[0-9]*$" string)
  2253. (= (length (substring string (match-beginning 0)
  2254. (match-end 0)))
  2255. (length string)))
  2256. (string-to-number string)))
  2257. (defun org-babel-import-elisp-from-file (file-name &optional separator)
  2258. "Read the results located at FILE-NAME into an elisp table.
  2259. If the table is trivial, then return it as a scalar."
  2260. (let (result)
  2261. (save-window-excursion
  2262. (with-temp-buffer
  2263. (condition-case nil
  2264. (progn
  2265. (org-table-import file-name separator)
  2266. (delete-file file-name)
  2267. (setq result (mapcar (lambda (row)
  2268. (mapcar #'org-babel-string-read row))
  2269. (org-table-to-lisp))))
  2270. (error nil)))
  2271. (if (null (cdr result)) ;; if result is trivial vector, then scalarize it
  2272. (if (consp (car result))
  2273. (if (null (cdr (car result)))
  2274. (caar result)
  2275. result)
  2276. (car result))
  2277. result))))
  2278. (defun org-babel-string-read (cell)
  2279. "Strip nested \"s from around strings."
  2280. (org-babel-read (or (and (stringp cell)
  2281. (string-match "\\\"\\(.+\\)\\\"" cell)
  2282. (match-string 1 cell))
  2283. cell)))
  2284. (defun org-babel-reverse-string (string)
  2285. "Return the reverse of STRING."
  2286. (apply 'string (reverse (string-to-list string))))
  2287. (defun org-babel-chomp (string &optional regexp)
  2288. "Strip trailing spaces and carriage returns from STRING.
  2289. Default regexp used is \"[ \f\t\n\r\v]\" but can be
  2290. overwritten by specifying a regexp as a second argument."
  2291. (let ((regexp (or regexp "[ \f\t\n\r\v]")))
  2292. (while (and (> (length string) 0)
  2293. (string-match regexp (substring string -1)))
  2294. (setq string (substring string 0 -1)))
  2295. string))
  2296. (defun org-babel-trim (string &optional regexp)
  2297. "Strip leading and trailing spaces and carriage returns from STRING.
  2298. Like `org-babel-chomp' only it runs on both the front and back
  2299. of the string."
  2300. (org-babel-chomp (org-babel-reverse-string
  2301. (org-babel-chomp (org-babel-reverse-string string) regexp))
  2302. regexp))
  2303. (defvar org-babel-org-babel-call-process-region-original nil)
  2304. (defun org-babel-tramp-handle-call-process-region
  2305. (start end program &optional delete buffer display &rest args)
  2306. "Use tramp to handle call-process-region.
  2307. Fixes a bug in `tramp-handle-call-process-region'."
  2308. (if (and (featurep 'tramp) (file-remote-p default-directory))
  2309. (let ((tmpfile (tramp-compat-make-temp-file "")))
  2310. (write-region start end tmpfile)
  2311. (when delete (delete-region start end))
  2312. (unwind-protect
  2313. ;; (apply 'call-process program tmpfile buffer display args)
  2314. ;; bug in tramp
  2315. (apply 'process-file program tmpfile buffer display args)
  2316. (delete-file tmpfile)))
  2317. ;; org-babel-call-process-region-original is the original emacs
  2318. ;; definition. It is in scope from the let binding in
  2319. ;; org-babel-execute-src-block
  2320. (apply org-babel-call-process-region-original
  2321. start end program delete buffer display args)))
  2322. (defun org-babel-local-file-name (file)
  2323. "Return the local name component of FILE."
  2324. (if (file-remote-p file)
  2325. (let (localname)
  2326. (with-parsed-tramp-file-name file nil
  2327. localname))
  2328. file))
  2329. (defun org-babel-process-file-name (name &optional no-quote-p)
  2330. "Prepare NAME to be used in an external process.
  2331. If NAME specifies a remote location, the remote portion of the
  2332. name is removed, since in that case the process will be executing
  2333. remotely. The file name is then processed by
  2334. `expand-file-name'. Unless second argument NO-QUOTE-P is non-nil,
  2335. the file name is additionally processed by
  2336. `shell-quote-argument'"
  2337. ((lambda (f) (if no-quote-p f (shell-quote-argument f)))
  2338. (expand-file-name (org-babel-local-file-name name))))
  2339. (defvar org-babel-temporary-directory)
  2340. (unless (or noninteractive (boundp 'org-babel-temporary-directory))
  2341. (defvar org-babel-temporary-directory
  2342. (or (and (boundp 'org-babel-temporary-directory)
  2343. (file-exists-p org-babel-temporary-directory)
  2344. org-babel-temporary-directory)
  2345. (make-temp-file "babel-" t))
  2346. "Directory to hold temporary files created to execute code blocks.
  2347. Used by `org-babel-temp-file'. This directory will be removed on
  2348. Emacs shutdown."))
  2349. (defun org-babel-temp-file (prefix &optional suffix)
  2350. "Create a temporary file in the `org-babel-temporary-directory'.
  2351. Passes PREFIX and SUFFIX directly to `make-temp-file' with the
  2352. value of `temporary-file-directory' temporarily set to the value
  2353. of `org-babel-temporary-directory'."
  2354. (if (file-remote-p default-directory)
  2355. (make-temp-file
  2356. (concat (file-remote-p default-directory)
  2357. (expand-file-name
  2358. prefix temporary-file-directory)
  2359. nil suffix))
  2360. (let ((temporary-file-directory
  2361. (or (and (boundp 'org-babel-temporary-directory)
  2362. (file-exists-p org-babel-temporary-directory)
  2363. org-babel-temporary-directory)
  2364. temporary-file-directory)))
  2365. (make-temp-file prefix nil suffix))))
  2366. (defun org-babel-remove-temporary-directory ()
  2367. "Remove `org-babel-temporary-directory' on Emacs shutdown."
  2368. (when (and (boundp 'org-babel-temporary-directory)
  2369. (file-exists-p org-babel-temporary-directory))
  2370. ;; taken from `delete-directory' in files.el
  2371. (condition-case nil
  2372. (progn
  2373. (mapc (lambda (file)
  2374. ;; This test is equivalent to
  2375. ;; (and (file-directory-p fn) (not (file-symlink-p fn)))
  2376. ;; but more efficient
  2377. (if (eq t (car (file-attributes file)))
  2378. (delete-directory file)
  2379. (delete-file file)))
  2380. ;; We do not want to delete "." and "..".
  2381. (directory-files org-babel-temporary-directory 'full
  2382. "^\\([^.]\\|\\.\\([^.]\\|\\..\\)\\).*"))
  2383. (delete-directory org-babel-temporary-directory))
  2384. (error
  2385. (message "Failed to remove temporary Org-babel directory %s"
  2386. (if (boundp 'org-babel-temporary-directory)
  2387. org-babel-temporary-directory
  2388. "[directory not defined]"))))))
  2389. (add-hook 'kill-emacs-hook 'org-babel-remove-temporary-directory)
  2390. (provide 'ob)
  2391. ;;; ob.el ends here